Akkermansia muciniphila: Amuc_1505
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Entry
Amuc_1505 CDS
T00736
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
amu
Akkermansia muciniphila
Pathway
amu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
amu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Amuc_1505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amu03021
]
Amuc_1505
03400 DNA repair and recombination proteins [BR:
amu03400
]
Amuc_1505
Enzymes [BR:
amu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Amuc_1505
Transcription machinery [BR:
amu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Amuc_1505
DNA repair and recombination proteins [BR:
amu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Amuc_1505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
ACD05326
UniProt:
B2UL53
LinkDB
All DBs
Position
1797639..1798763
Genome browser
AA seq
374 aa
AA seq
DB search
MSENETTTAEETAVTTLARFEVPSRLEKIEDPNDANHLTFVAEPFENGYGHTLGNSLRRV
LLGSLEGAAITSVRIAGAQHEFSSLPGVVEDVTEIVLNLKKVKFKHNGKEPRLLSLRVHK
QGVVTAADIADDTVYQVVNPDQIICTLDQDTMFECEFQVRVGRGFATGDENKVPDMPIGV
IPIDSIFSPVTRVKYSVQNTRVGQMTDYDKLILEVWTDGRIAPADAMLQASAILRHHLDV
FVNYDDKQVNFEEAPSAVQDEETARLRKLLNMSVNEIELSVRAANCLNNANITTVGQLAM
KSESEMLKYRNFGKKSLNEIKDKLLELGLSLGVQVDPSLLTGPVPQAKPRLGLEEESPVG
LADLIAANIEDDDD
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaaacgaaaccactactgcagaagaaaccgccgttaccacgctggcccgtttt
gaggttcccagccgtctggaaaaaattgaagatccgaatgatgcgaatcatttgaccttt
gtggcggaaccgtttgaaaacggttacggccatacgcttggcaactccctgcgccgcgtt
cttctgggttctcttgaaggcgccgccattacctccgtccgcatcgccggtgcgcagcat
gaattttcctccctgcccggtgtggtggaagatgtgacggaaatcgtgctgaacctgaaa
aaggtcaaattcaagcataacggcaaggaaccgcgcctgctctctctgcgcgtgcataag
cagggcgttgtgactgctgccgatattgccgacgacaccgtttaccaggtggtcaatccc
gatcaaatcatttgcactctggatcaggacaccatgttcgaatgcgaattccaggttcgc
gtgggccgcggttttgccaccggcgatgaaaacaaggtgccggatatgcccatcggcgtg
attccgatcgactccattttctctccggttacccgcgtgaagtattctgtgcagaatacc
cgtgtggggcagatgactgactacgacaagctgatccttgaagtctggacggacggccgc
atcgcccccgcagacgccatgctccaggcttccgccattctgcgccatcacctggacgta
ttcgtcaactatgacgacaagcaggtcaactttgaggaagctccttccgccgtccaggac
gaggaaacggcccgcctgcgcaagttgctcaacatgagcgtcaacgaaatcgagctttcc
gtgcgtgccgccaactgcctcaacaatgccaatatcacgaccgttggccagcttgccatg
aagagcgaaagcgaaatgctcaagtaccgcaatttcggcaaaaaatccctcaacgaaatc
aaggacaaattgctggaactgggtctttccctgggcgttcaggtggatccatccctgctt
accggtcccgtgccgcaggccaagccgcgcctgggtctggaagaggaaagccccgtgggc
ctggcagacctgattgccgccaacatcgaagacgacgacgactaa
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