Akkermansia muciniphila: Amuc_1938
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Entry
Amuc_1938 CDS
T00736
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
amu
Akkermansia muciniphila
Pathway
amu03030
DNA replication
amu03410
Base excision repair
amu03420
Nucleotide excision repair
amu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Amuc_1938
03410 Base excision repair
Amuc_1938
03420 Nucleotide excision repair
Amuc_1938
03440 Homologous recombination
Amuc_1938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amu03032
]
Amuc_1938
03400 DNA repair and recombination proteins [BR:
amu03400
]
Amuc_1938
Enzymes [BR:
amu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Amuc_1938
DNA replication proteins [BR:
amu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Amuc_1938
DNA repair and recombination proteins [BR:
amu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Amuc_1938
NER (nucleotide excision repair)
GGR (global genome repair) factors
Amuc_1938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_2
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ACD05751
UniProt:
B2UNN5
LinkDB
All DBs
Position
2350820..2353657
Genome browser
AA seq
945 aa
AA seq
DB search
MTDSPSKRLFILDGMALAYRAHFAFFSNPIRNSKGVNTSAVYGFANTLLGILEHERPTHI
AACFDTSAPTARHKLYPAYKANRESMPEELSDQMPLIFRLLEAMNIPILRYEGYEADDTI
GTLARIADGTEGFQTYMVSQDKDLGQLISSTCFLWKPGKRGNDHEVIDLAKLKEQWGIER
ADQVVDILALMGDSSDNIPGLPGVGEKTAKLLIGEFGSVENLLSNTDKLKGKRKQIVEEN
GAMATLSKQLATIDRNVPLTVTLPELVKREPSPEELQALLQELEFRSMQAKLFGKKAPEP
RKAPLPADDLFAPAPRTEQPLSAEPSAPVSGARQNGSGQMDLFEERHLKTVDDFRHEYII
ADTPEARSSMAAELEKYDSWCFDTETTGLNPLMDNLLGVSFCAEPHKAWYMPVSGPADLE
AVRPLLEGPAEKIGHHLKFDLEVLRANGIHVKGPFFDTLLAHALIAPGMKHGMDVLAENL
LQYSTIKLKDIAAPGAKKRELDTSGVPVEVMGKYSAEDADITLQLSAVLKRQVKESGMEK
LFRTVELPLLPVLADMEFSGIRVLPESLEKASVKVGAIIDGLRERIEEAAGHPLNLNSPK
QLGDFLFGELELVKKPKKTKTGQFVTDEDTLSALAPQHPIIADILAYRENMKLKSTYLDA
LPKYICPRDGRIHTQFHQMLTATGRLASQDPNLQNIPVRTEQGRLIRTAFVPASEKYTML
SADYSQIELRIMAALSGDPAMCGAFREGRDIHTETAARVYGIPRDQVDAVMRRAAKTVNF
GIIYGISAFGLSQRLGCPRGEAATLIENYFTQFPVVKSFMEDLVHKAEQAGYAETLLGRR
RMIPEINSANKTIKSAAERTAINTPIQGTAADMIKIAMIHVDKLLKGTRSRLILQIHDEL
LVDLHRDELDLIPKIEEAMVSALPLPNGVPILVEARTGGNWLEAH
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgactgattccccttccaagcgcctttttattctggatggaatggccctggcttacaga
gcccacttcgcctttttctccaatcctatccgcaattccaagggagtcaatacttccgcc
gtgtacggcttcgccaatacgctgctgggcattctggagcacgaacgccccacgcacatc
gcggcctgtttcgacacttccgctcccacggcgcgccataagctttaccctgcctataaa
gccaaccgggaatccatgccggaagagttgagcgaccaaatgcccctgattttcagattg
ctggaggccatgaatattcccattctgcgctatgagggctatgaggcggacgatacgata
ggcacgctggcacgcatcgcggacggtacggagggattccagacctacatggtttcccag
gacaaggacctgggccagcttatttcctccacctgctttctgtggaaacccggcaaaagg
ggcaatgaccacgaagtgattgacctggcaaagctcaaggagcaatggggcattgaacgt
gcggaccaggtagttgatattctggccctgatgggcgacagctccgacaatattccgggg
cttcccggcgtgggggaaaagacggctaagctgctgatcggagagttcggctccgtggaa
aacctgctgtctaatacggataaactgaaagggaagcgcaaacagattgtggaggaaaac
ggggccatggcaaccctttccaagcaactggccaccattgaccggaacgttcccctgacg
gtgaccctgcctgaattggttaaaagagaacccagtccggaagaactgcaggcccttctc
caggagttggaattccggtccatgcaggccaagctgttcgggaaaaaagcgccggagccc
agaaaagcccccctcccggcggacgatttgtttgctcccgccccccggacggaacaacct
ctgtcggcggaaccctccgcccctgtgtcgggagcacggcagaacggttcgggacaaatg
gatttatttgaggaacgccatttgaaaacggtagatgatttcaggcacgaatatattatt
gcagatacgccggaagcccgttcctccatggcagccgagctggaaaagtatgattcctgg
tgcttcgacacggaaacgacgggcctgaaccccctcatggacaacctgctgggcgtctcc
ttttgcgctgaaccgcacaaggcatggtacatgcctgtctccggtccggcggatctggaa
gcggtcaggccgctcctggaaggccccgcagagaagatagggcatcacctgaaatttgac
ctggaggttttgcgagccaacggcattcatgtcaaaggcccctttttcgatacgttgctg
gctcatgccctgatcgctccaggcatgaagcacggaatggacgttctggcggaaaatttg
ctgcaatattccacgattaaactgaaggacattgccgctccgggagcaaaaaaacgggaa
ctggacaccagcggcgttcccgtggaagtaatgggcaaatattcggcggaggatgcggat
atcaccctccagctttccgccgtcctgaaaaggcaggtcaaggagagcggcatggaaaaa
ctgttccgtaccgtggaattgcccctgcttcccgtgctggcggacatggagttttccggt
atccgcgtgcttccggaatccctggaaaaggcttccgtcaaggtaggagccatcattgac
ggcctgcgggaaagaattgaagaagccgcaggccatcccctgaatctgaattcccccaag
cagctcggagatttcctgttcggagaactggagctggtgaagaagcccaagaagacgaag
acgggccagttcgtgacggatgaagacaccctttccgctctggccccccagcatcccatt
atagcggatatcctggcctaccgggagaatatgaagctgaagagcacatatctggatgcg
ctgcccaagtatatctgcccgcgggacggacgcatccatacccaattccaccagatgctg
accgcaaccgggaggcttgcctcccaggatcccaatcttcaaaatattccggtaaggacg
gaacaggggcgcctgatccgcaccgcctttgtccccgcctcagagaaatacaccatgctg
tctgcggattattcccagattgaactgcgcatcatggcggctctttcaggagatcccgcc
atgtgcggagcattcagggaaggacgggacatccatacggaaacggccgcccgtgtgtac
ggcattccccgcgaccaggtggacgccgttatgcgccgtgcggccaaaacggtgaatttc
ggcattatttacggcatttccgccttcggtctctcccagaggctgggctgcccccgcgga
gaagccgccactttgattgaaaactattttacccagttccccgtagttaaatccttcatg
gaagacctggttcacaaagcggaacaagccggttacgcggaaacgctattggggcgacgg
aggatgattccggaaatcaattccgccaacaagaccattaaatccgctgcggaacgtact
gccatcaacacccccatccagggcacggcggcggatatgattaaaatagccatgattcat
gtggataaattgctgaaaggcaccagatcccggcttatcctccagattcatgatgaattg
ctggtggacctgcacagggatgagttggatctcattcccaagatagaggaagccatggtc
agcgcgctgcccctgcccaacggcgttcccattctggtggaagccaggacgggaggcaat
tggctggaagcccattaa
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