Acropora muricata (staghorn coral): 136887730
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Entry
136887730 CDS
T11512
Name
(RefSeq) tetratricopeptide repeat protein 37-like
KO
K12600
superkiller protein 3
Organism
amua Acropora muricata (staghorn coral)
Pathway
amua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136887730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amua03019
]
136887730
Messenger RNA biogenesis [BR:
amua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
136887730
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_16
TPR_2
TPR_17
TPR_1
TPR_14
TPR_CcmH_CycH
TPR_19
TPR_8
TPR_11
CFAP70_TPR_C
TPR_12
CFAP70_mid_TPR
ARM_TT21_C
RMD1-3
TPR_7
CABIN1_N
ANAPC3
TPR_9
TTC22_N
DUF7017
TPR_SusR
Motif
Other DBs
NCBI-GeneID:
136887730
NCBI-ProteinID:
XP_067016500
LinkDB
All DBs
Position
10:3858244..3896323
Genome browser
AA seq
1646 aa
AA seq
DB search
MAASAKETKALLKNARECIKNKEYKESLKHCKGVLKLDKTNYTALVFIGKCAAELDQADQ
SLMAYRKAIESDETQPLAWQGLAALCEKEDNSKLKPELFEVYPKLLQFHKGDKSKWVEVA
RKLAILNENQGDAFQAAAGWEEIVASTEDKTEQFNIWSRIIQILEKVQSPEKEEINKKLK
EIYKKVVTCEGLPEELNNQLERNFERYVKLLSKLQASENQELLKQQPTETIDAAKSMMQL
FPRSKFALEFLAKDFLLSLVNAPTMAMAELFQKLCHMYPESGIGAIGLGSVILHQKEFIV
ARELLQKGLQVFSDCPYGWLSLCRAQRSLHNYQAAAKAASKGISCVSCSSANVQKAVKRK
LSFSRADALVKQSPEAALLAREVYEELLEDADVQEEVEILTGLGQAYLTQGDVSQATQFC
SKALGIDASFASALALQGEISIHEGLFDDAELRFLEALEKGEECALYHFLLGKLYWKMNG
NLRADKKKCLASFLKAAKLDPCYSPSFLYLGHYYLKVLKDVSKACRCYQKAFDLDPDSDD
AGTALGDSLTELGDEVAALNLYKNITAMSSPGKGKWAWLRLGLFHLKRNESTEAITCFQS
ALRADPKDRHCWECLGEAYMSRGSFTAAMKAFTKATELDPSSLYCLYQLAAIKQLLSVHG
EAIKEYKLILEMQPDYVPALKGLGETYLNQARSAIEQDLNGKAVDCVLEAITVLAQAIKH
KPGLSCLWKLLGDCCTIIHPIANEAFRGSIPDNLRKFVRGEPEEFVQKQDMLALGSSAYG
KALKLQPECGCLWGDLGFNCFQQAKLLEGSDKEKMAHRSTQALKKGLSLQPSNHKLWNTL
GVVAASEEVNNPELSQHCFIVSIKTEPNNVIAWTNLGVLYLEHGKIELAHEAFKNSQALD
PSYGAAWTGQATIAEIIGSEEAMDLFRHTTELGSHREGNIGYAHWVCSSLLPDKSPENHV
ILKGHPVPTLSHLHPEYRKAVLQSSTALSKYTDCIRNDAGAYNMYGLILENQKLFLQAEQ
AFTSAIKLLQQSEKEIDRQHLNSVIINHARVLCALGRYKESAARYQAAKPLNEFHDVCGL
ALSLFMAGQLKDSFQAYEQAYQLATTDGDRSCVLAALGMLGYALSEMDGAKTMLFKSSQL
QPACHQGLMALCTLGLVSGDATLAGAALGELMRANNGNEALTGHICYLYSRFYALQGNQK
LGRSHIMKAIHSNPSSSVLWSHLASYLLQACPDELEAAACCSESSARLGGSHSVEHNPAI
HPAGIVGSGALRNHDKEAARISATIRTRAGLIASQKAVHAHPDHLSSWSVLAASVTATSI
ARNRERLERERGILDTRIAQFVQMKASTETDALNRRSENQLPALVNWRISHLESAQSWSV
IHHGHGLLFSKMLKEAADHVDQALTVYSSVPHVSTQLHFLKAQVLLASEQPVETGLNMLQ
ASLLSSPVHSPNAWQVLAEVQANQGSAKAAELCYRRCLQAGMDGKSQSWRVVPLIRLALL
ALRVAQKESPDRDRFLNLALEASSEVVKLKTDFIVAYLIQGIVYFLQNNSGESRRVLERV
LDSTWSGLPVAQYWLLLLYLVKKDLSAAQDLLTQARFSGNTRLDLLYYRFTKNGEIPAEF
RLRTIEKCVHINPSESVFWNSLKPTA
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccgcgaaagaaacgaaggctttgctgaaaaatgcaagggagtgcatcaaa
aataaggaatataaggaatctctcaagcactgcaagggggttttgaagcttgataaaaca
aattacactgcgctggtgttcattggaaaatgtgctgcagaattggaccaagccgatcaa
tctcttatggcatacaggaaggctattgaatcagatgaaacacagcctcttgcctggcag
ggcttagctgctttgtgtgaaaaggaagataattcaaaactaaaacctgaactgttcgaa
gtttacccaaaattactacagtttcataaaggggacaaatctaagtgggtggaagttgca
aggaaacttgctatattgaatgaaaatcaaggtgacgcatttcaggctgcagcaggctgg
gaggagattgttgcatcaactgaggacaaaacagagcaatttaatatctggagtagaatt
atacagatccttgaaaaggttcaatcacctgagaaagaagaaataaacaagaagttgaag
gagatatacaagaaagttgtcacatgtgaggggttgcctgaggagttaaacaaccaacta
gaaagaaactttgaacgctatgtaaaactcttgtcaaaacttcaggcttctgaaaatcaa
gaattgctcaagcagcaaccaactgagactattgatgcagctaaatctatgatgcagtta
tttccgaggtctaaatttgccttggagttcttagcgaaagacttccttctttccttagtc
aatgcacccacaatggcaatggctgaattattccaaaagctgtgtcacatgtatccggag
tctggcattggtgcaattggtcttggcagtgtcatactccatcagaaagaattcatagtt
gccagagaattactgcagaaaggtcttcaggttttcagtgattgtccctatggttggttg
tcactttgcagggctcaaagaagccttcacaactatcaagcagcagcaaaagctgcaagc
aaaggtatcagctgtgtatcttgttcatctgcaaatgttcaaaaagcagtaaagaggaaa
ctaagcttttctagagctgatgctctggtgaaacaaagcccagaggcagcattactggca
agagaagtatatgaagagctactagaagatgcagatgtgcaagaggaagtagaaattctc
actggccttgggcaggcatatcttactcaaggggatgtttctcaggcaacacaattttgc
tcaaaagccttgggtattgatgcaagttttgccagtgctcttgcattacagggagaaata
agcatacatgaaggactttttgatgatgcagagttaaggtttttggaagcgttagaaaag
ggtgaagagtgcgctctttatcactttctccttggcaaattatactggaaaatgaacgga
aatcttcgagcagacaagaagaaatgcctagcttcatttctgaaggccgcaaagttggac
ccttgttactcgccatcatttctttatttaggacactactatctcaaagtgttgaaggat
gtgagtaaagcctgtagatgttatcagaaagcgtttgatcttgatccagattcagacgat
gctggaacagctttaggagattctttgacggaactaggagacgaggttgcagcgcttaac
ttgtacaagaacataacagccatgtcatcccctggaaaggggaaatgggcgtggctgcgg
cttggattatttcacttgaaacgcaacgagagcacagaagcaattacttgttttcagagt
gcattgagagccgatcctaaagatagacattgctgggaatgtcttggtgaggcatacatg
agccgtggaagcttcacagctgcaatgaaggcattcacaaaagccactgaacttgatcca
tcgtcgttatattgcctgtatcagttggctgccattaaacaactgttgagcgttcatgga
gaagccatcaaggagtacaagctgattctggaaatgcagcctgactatgtcccagctctc
aaaggcctgggagagacgtatctaaaccaggcacgctcagccatagagcaagaccttaat
ggcaaagcagtggactgcgtacttgaggccataactgttttggcacaagcgattaaacac
aaacctgggctttcttgtctttggaaacttcttggtgactgttgcacgattatccatcca
attgcgaatgaagccttcagagggtccattccagacaaccttaggaagtttgtccgtgga
gaacccgaagaatttgtgcaaaagcaggatatgctagctttgggatcaagcgcttatgga
aaggcactgaagctgcaaccagaatgtggatgtttgtggggagatctgggattcaactgt
tttcaacaagctaagcttctggaggggagtgacaaagagaaaatggctcacagatctact
caggcacttaagaaaggtctttcgctgcagccatccaatcacaaattgtggaacaccctt
ggagtggtggccgcctctgaagaagttaacaatcccgaactcagtcagcactgttttatc
gtgtccattaaaacggagcccaataatgtaatcgcttggacaaatctgggagttctttac
ttagagcatggaaaaatagagcttgctcacgaggcctttaaaaattctcaagcgctagat
ccatcatatggtgcagcttggacgggacaggcaaccattgctgagattataggaagtgaa
gaagccatggacctttttcgacacacgacagagctgggctctcaccgagagggaaacatc
ggctacgctcattgggtttgttccagtctgctaccggacaaatcccctgagaatcacgtg
atactgaaagggcatccagttccaactctctctcatcttcatccggaatatcgcaaagct
gtgctgcaatcttcaactgccctcagcaaatatacagattgcataagaaacgacgcaggt
gcctacaatatgtatggcttgatactggaaaatcagaagctgttcctgcaggcagaacaa
gcttttacgagtgctataaaattgcttcaacaaagtgagaaggagattgatcgacagcat
ttgaatagtgtgattattaatcacgcgagagttctttgtgcactgggtcgctataaggaa
tctgctgctcgttatcaagctgcgaaaccactgaacgaattccatgatgtgtgcggtctt
gcgctatcattgttcatggctggccaattaaaagacagctttcaagcctatgaacaagcc
tatcagctggctacaaccgacggtgacagatcttgtgttctagcagcactgggcatgctg
ggatatgcacttagtgaaatggatggagctaaaacgatgctttttaaaagttcacaatta
cagcctgcttgtcatcaggggctaatggccctctgtactcttggactggtcagcggggac
gctacacttgctggggctgctctcggcgaactgatgagagcaaacaatgggaacgaagcg
ctgactgggcatatctgttatctgtattctcggttctacgcactacagggaaatcagaaa
cttgggcgaagtcacatcatgaaagcgattcacagcaatccaagtagcagtgtattgtgg
agtcacttggcttcctatctcctgcaagcttgccctgatgagctggaggctgcggcttgt
tgctcggaatcttctgcaagacttggaggtagccactctgtcgagcacaatcccgcaatc
caccctgctggtatcgtaggctcaggagctttacgtaaccatgacaaggaagcggccagg
atcagtgcaacaatcagaactcgtgcaggtcttatagcttcccagaaggctgtgcacgcg
caccctgatcatctttcaagctggtcagttcttgcagcttcggtgacagccaccagcata
gcgagaaaccgtgagagactggaaagagagcgtggcattctcgatactaggattgcacag
tttgttcagatgaaagcttccacagaaactgacgccttgaaccgtcgcagtgagaatcag
ctaccagcgcttgtaaactggcggatcagtcatctggagtctgctcagtcttggtccgtc
attcatcatggccacggcctgttgttctctaaaatgctcaaggaggcagctgaccatgtc
gatcaggctttgactgtgtacagctctgttcctcatgtctccactcagctccatttcttg
aaggcgcaagtactattggccagcgaacagcccgtggaaactggactcaatatgttgcag
gcgtccctgctttcgagcccagtccattcgccaaatgcctggcaggttttagctgaagtg
caagccaatcagggatcagctaaagcagcggagctttgttataggcggtgtctgcaggca
ggaatggatgggaagtcacaaagctggcgagttgttccccttatacgactggccctgttg
gctcttcgagtagcacagaaagagtccccggatcgagaccgctttctcaaccttgctttg
gaagcctccagtgaggtggtaaagttgaaaacagactttatcgtggcttatctcattcaa
gggattgtttatttcctgcaaaataactctggcgagtcgagaagagtccttgaacgtgtt
ttagactcaacatggagtgggcttcctgtggctcagtactggcttctcttgctttatctg
gtgaaaaaggatctttctgctgcacaggaccttttgactcaagcaagatttagcggaaat
actcgcttggatttgttatattatcgatttaccaagaatggagaaattccggccgaattt
agactgcgcacaatcgaaaagtgcgtccacattaatccgtctgaaagtgtgttttggaat
tcattaaagcctactgcttag
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integrated database retrieval system
