Acropora muricata (staghorn coral): 136888179
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Entry
136888179 CDS
T11512
Name
(RefSeq) whirlin-like isoform X1
KO
K21879
whirlin
Organism
amua Acropora muricata (staghorn coral)
Brite
KEGG Orthology (KO) [BR:
amua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amua03037
]
136888179
Cilium and associated proteins [BR:
amua03037
]
Primary cilia and associated proteins
USH complex and associated proteins
136888179
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Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
USH1C_N
DUF7271
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
136888179
NCBI-ProteinID:
XP_067017021
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Position
10:26309201..26325476
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AA seq
1113 aa
AA seq
DB search
MEDISMEQTPQQTSRKMSENVRELQSALTKVLKSEDRVFFIESLNQYQRDKNVNSLVVTL
KLVLNTARKREVYPLLYQIIPHGDREIFHRLWHQGLEDPRSRASSKSPARSPRNLRGNPV
STSLPTNLQRYASDSGIDLPNMTQSHSSTDKKYPIKQLIIKRPSNSGFGFCIRGGAEHGV
GLYVSSVDARSVAENEGLLPGDHIVQVNGTKFDGLTHAQAVKVIKNSKKLNLFVRSVGRI
PNSFVAESTCKWVDMSGRRVSPPPGVDSNGCFLSAGGIDKSDLRLLGDDDERKVNIFVED
GTKLGLLIRGGSDCGLGIYIAGVDVDGAADQAGLKAGDQILDVNGQSFLNISHKQAVNVL
RSTRNMIVTLKDVGKLPFTRVTHDKMKWIKNSTKNGKINSVPDQVSHITQVEIHSPPGSS
QQGQLPSSNRHHKRAGRKGTTESMFHHGIAGSQVLYNGGLPSQKNLIADQAGQILNENEL
GTLKYYLTEYSSGYISISAFALALFDLLNTPAKMSLMTEIRSSVEPKDIDRFDDLVLKKE
IEIMKSGQFLGSQFDDDRHSIHSYASSVSSFSGKGSSSRSSAKGSLDDTGSRPITPPQVP
EILPANVKVKDDINTDATEPYEVYEATLTFHDDNEQIFDEEEDVGLPSFLTIDPVSLDLP
RTEGTSPQHLGDNLSMPLLTSSPVSDENRPDSPTKTAGETTTSESVGDNTRQKSSLLGRH
RESSYANGEVSSTGLATSFHGDDRSGGDLHYRKDPQKPQRARNPFIFPTTFQNNSSNSEN
VTSISAIFESPAKENHSSVNSPRQLVAPPTEDEPKVEYGNAKRTLNGEELRSELTKLPDR
KRLASWGEVQEEPTTSTLSAHSLTIAERVTDPIGLHQEHFSNSNSEGKNVAGNNAAKQST
AQSQNQLSISSRSQSSSKNRKSWDGVQNPGSPEDHQNVSLLERPKDNKERSCSDSNLMNL
PKDQQKRIQTKHRASQELYDLHQFCKNKDENTNRTEHVGRQRNTVTIETRESPRGRVKEI
ADSVFEVEVDKSSGSLGLTLEGGTDTGREIRINAIKEGNFAAWKCGRLKVGQAVLQVDGT
PLTGMTSGKAFLTLRHAYSSSDSPVLKLLIRDI
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggaagatatatccatggaacaaacgcctcaacaaacatcgaggaaaatgtcagagaac
gttcgcgaactgcagtcagctctaactaaagttctcaaaagcgaagatcgagtattcttt
attgaatcactaaatcaatatcagagggataagaatgtaaacagccttgttgtgacttta
aagttagtgctcaatacagcaaggaagagagaagtgtatcctctgttgtatcaaatcatt
ccccatggcgaccgagaaatttttcatcgactttggcatcaaggtttagaagacccgcgg
tcccgtgcaagttcgaaatctcccgctcgatcaccgagaaatcttcgagggaaccccgta
tcaacaagtttgcccaccaatcttcaaagatatgcatcggattcgggtatagatttaccg
aatatgacacaatctcattcgtccacagacaagaaatatcctataaaacaactcataata
aagcgtccttcaaactctggctttgggttttgtattcgtggaggggccgaacatggcgtc
ggattatatgtgtcgtctgtagatgcgaggtcagtggcggaaaatgagggtcttttacct
ggagatcacattgtacaagtcaatggcactaagttcgatggactcacacatgcacaagct
gttaaggtcattaaaaacagtaagaagctcaacttgtttgtgcgctcagttggacgtata
cccaatagctttgtcgctgaatctacatgtaaatgggtagacatgagtggtagaagagtg
tctccaccaccgggggttgattcaaatggatgcttcttgtctgctggtggtatagacaag
agtgatttaagactgctgggggatgacgatgaacgaaaggtgaatatctttgttgaagat
ggcacaaagctaggattattgattcgtggaggatcagattgtggcctgggaatttatatt
gcaggagttgatgttgatggggctgctgatcaagcaggacttaaggctggtgatcaaatc
ttggatgtgaatgggcaaagctttctgaacatctctcataaacaagctgttaacgttttg
aggtcaacaagaaacatgatagttactctgaaagatgttggcaaactgccatttaccaga
gttacccatgataagatgaagtggataaaaaattctacgaaaaatggcaagatcaacagt
gttcctgatcaagtctctcacatcactcaagtagagatccattcaccccctggttcttcc
cagcaaggtcaactgccgtcctccaatagacaccacaaaagagccggtagaaagggaacc
acagagtcaatgttccaccatggtatagcgggatcccaagtactgtacaatggtggtctg
ccttcccaaaagaatctgattgcagaccaggctggacaaatcctcaatgagaacgagttg
gggactttaaaatactacttgacagaatattccagcggttatatctctatcagtgccttt
gcattggctttatttgatctccttaataccccagctaagatgtcgttaatgacagaaata
agaagctctgtagaacctaaagacattgatcgatttgatgacctagttctcaagaaagaa
atcgagattatgaagagtggtcagtttcttggcagccaatttgatgatgaccggcattcg
attcactcatacgcaagtagtgtctctagtttctctggcaaaggatcctcgagtagaagc
tcagcaaaggggtccctagatgatactggatcacgcccaatcacgccccctcaagtgccg
gaaattctaccagcaaatgtgaaagtcaaagatgacattaacaccgatgcaaccgagccg
tatgaagtttatgaagcaactcttacatttcacgacgacaatgaacagatatttgacgaa
gaggaagatgtgggacttccctcttttcttacaatcgacccggtttcactagatctccca
aggacagagggtacttcacctcaacaccttggcgacaatctcagcatgcctttgctgacc
tcctctcctgttagtgatgaaaacaggccagattcgccaacaaaaacagctggagaaacg
acaacaagtgaatcagtgggtgataacacgaggcagaaaagttcgcttctaggacgacac
agagaatcatcttacgcaaatggagaggtgagctcaacagggttagcaacctcattccac
ggcgatgatcgatctggaggagatctccactataggaaagatccccagaagccgcagaga
gcacgaaatccatttatattcccaactacttttcaaaacaattcaagtaattcagagaat
gtaacttcgatatcggcaatcttcgaatcaccagcgaaagaaaaccattcttcggtaaat
tcgcctcgccagcttgttgctccgcctaccgaagatgaaccgaaggtcgaatacggaaac
gcgaaaagaactttaaatggagaggaactgagatcggaattgactaaattaccggacagg
aaaaggttagcttcctggggtgaagtccaagaggaacctacaacgtcgacgcttagtgct
catagtttgacgatcgccgaacgtgtcacagacccgataggcttgcaccaagaacatttt
agtaactcaaatagtgaagggaaaaacgtagcaggtaacaatgcagctaagcagagcact
gcacagtcgcaaaaccagttgtcaatctccagtcgcagccagagttcgtcaaagaacagg
aaaagttgggatggagtgcagaatcctggatcccccgaagatcaccaaaatgtctcccta
ctggagcgaccgaaggataataaagaacggagctgcagtgatagcaacttgatgaatctt
cccaaagatcaacagaagagaattcaaactaaacacagagccagccaggaactctatgat
cttcaccagttttgcaaaaataaggacgaaaacactaatcgcaccgaacacgtcggtcgt
caaagaaacactgtcaccatagagacgagggaaagtccacgaggcagagtcaaggaaatc
gcggattcagtttttgaggttgaagtcgacaaatccagtgggagtttgggtctaacatta
gagggcggtacagacacgggaagagaaattaggattaatgccattaaggaagggaacttc
gcggcttggaaatgtggaagattaaaagtgggtcaggctgtacttcaggtggacggcacg
ccgctcacggggatgaccagcggtaaagcgtttctcactttaagacatgcgtactccagc
tcagactctcccgtattgaagttacttatccgagacatttaa
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