Acropora muricata (staghorn coral): 136910372
Help
Entry
136910372 CDS
T11512
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
amua Acropora muricata (staghorn coral)
Brite
KEGG Orthology (KO) [BR:
amua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amua03021
]
136910372
03036 Chromosome and associated proteins [BR:
amua03036
]
136910372
Transcription machinery [BR:
amua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
136910372
Chromosome and associated proteins [BR:
amua03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
136910372
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
SH2
HHH_3
S1
HHH_9
Spt6_S1
Tex_N
Tex_YqgF
S1_RRP5
YPP1_N
Motif
Other DBs
NCBI-GeneID:
136910372
NCBI-ProteinID:
XP_067032168
LinkDB
All DBs
Position
3:10214780..10243723
Genome browser
AA seq
1633 aa
AA seq
DB search
MSNFGDSEAEEDSLDESLSNKSGDEDEDDEEEEKDDANDIINDEEEESGDEEAHHGHHHR
KRTKHEAEELDEEDLSLIEENLGIRLQRKKPRLKKVKLLDSDDDEEDQGAENSATTEREA
IANELFEGAEDTAEVPIEPPVQPQVDDTYADIDDSDESEEDVDDFIVDDEGNPIKHAKKK
KRIPGTVQDSALMEAQDIFGLDFDFDEFEKYGREDYSSGEEEDDYLDEDDEDGVLRRPKK
KSTKKSIYEVFEPSELEKGMLTAKDNEVRTADVPERFQVRDFPVKSSEEGELDDEADWIY
RHAFLETPISQQQDIFDGDMHSRTKLPKPVSAVNKIKEALNLMRNHLFEVPFIANYRKEY
IEPELNIEDLWKVWAWDEKWSQLRTRKDNLHRLFQEMQDYQFHTIQENGDQPLDENTRIL
QAEDIDRLDAVESMEQLKDVYSHFMLYYKNDISAMWEAKKKRKQAEGDTADGETNATLSK
QKMPAKRDLYTICRHAGVSGLARKFGLTPDQFGENLRDNYQRHETQQHPMEPEDTAESYL
SSTFSTVIEVLEAAQHMVAMQIARDPLVRQCVRQTFYERAKLKIKPTKKGKKEIDESHAC
SPFKYVKNKPVRDLVGDQFLRMCKAEEDGLLTISITIDLDKNAGYHTYFDEVKQLYYRDE
FSHLVQEWNTQRMNALARAFNQMLYPLFEKELKLKLLEEAKASVIDACCRRLKSWIEVAP
YQPEQHVEEQEFDDSVNSEGLRVLACSISPNPDTPAFLAMLDGGGQVNDYLRLRYLLNRR
NTNKAKEREDKEKDLTTLKQFILKKRPQVIVVAAECREAIAVVDDMKMCIAELEQENQIP
SIPVEALDGEVARVFMGSPRSENEFREYPPLLRHAVSLGRRIQDPLSEFAALCVEEDELL
CLRLHPFQDHVAKEQLVKCLHQEFVTVVNDVGVDPNRLLEHPHTVALLQFVCGLGPRKAS
FLLKSLRQQCTRLENRSQLVTVCGLGPQVFLNCAGFIKIDTSAISDSTTNYIEVLDGSRV
HPETYEWAKKMAVDALEYDEATMESNPSSALEEILETPDRLKDLDLDAFAEELERQGYGN
KRITLYDIRDELFGQYRERRLPYRALTVEERFRLLTGETSETLYVGKMVVCGVTGFANRK
PPRDMIDQAQPVRNEETGQWQCPFCLQDTFPDLSEVWTHLDNGSCPGQAIGVRTRLENGL
SGFIPTKMISDKRISSPRDRVKVGMNLHCRVTRINMERLQLDLTCRSSDLLDKEGKYSPL
KDKYFDEDAADVDKKEEEAAKKKANRPKYVKRVIVHPSFKNISFKEAERLLAEMEQGECI
VRPSSKGADHLTVTWKVDEGVYQHVDVREEGKENAFSLGRSLWIDSEEFEDLDEIIARHV
QPMASFAREILNHKNYRAVDGNKTKLEEILLAEKRKAPQRIPYLLSTTKDFPGKFFLGYL
PRVKARVEYVSVTPDGFRYRGRVHATLNGLFKWFKEHFRDPIPGTPRQRMPVAMSESNTP
YTPGGTPSINVDVDPARLVPQLQQHFPRGIADPKVYSAALAAVRQRQESQKKTPTQLTPA
QWGAAAAQHIQRQNKQRAQQTPTQETPTQQGYQQFPQYGYYQQHQDQSQTPTYGYQQTYS
GKKSSSKEGSKSR
NT seq
4902 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattttggcgacagtgaagcggaggaagactctttggacgaaagtctgtcgaat
aaaagcggagacgaggacgaagacgacgaagaagaagagaaagatgatgcgaacgacatt
ataaacgacgaagaggaagaaagcggtgacgaagaagctcaccacggccatcatcacaga
aaacgcactaaacatgaagctgaagaactagatgaagaagatttatctttgatagaagaa
aacttgggcattcgtttacaacggaaaaagcctcgactgaaaaaggtgaagttgttggac
tcggatgatgatgaggaggaccaaggtgctgagaattccgcgacaactgaaagagaagca
attgctaatgagctttttgagggtgctgaagatactgcggaggttcccattgagcctccc
gtccagcctcaagtcgatgacacctatgcagatattgatgactccgatgaatcagaagaa
gatgtggatgattttattgttgatgatgagggaaatcctatcaagcatgccaagaaaaag
aaacgaattccaggaactgtgcaagattcagccctcatggaagctcaagatatctttggc
cttgattttgattttgatgaatttgaaaagtatggcagagaagattactcatcaggtgag
gaggaagatgattatttagacgaggatgatgaagatggtgtactccgaaggccaaagaaa
aagtccaccaagaaatcaatttatgaggtgtttgaaccaagtgagctggagaaaggaatg
ttgacagccaaagataatgaagtcagaactgcagatgtacctgaaaggtttcaagtgcgg
gactttccagtgaaatcatctgaagaaggagaacttgatgatgaggcagattggatttat
cgccacgcgttccttgaaacaccaatatctcagcaacaggacatctttgatggagacatg
cattcccgcaccaaactaccaaagcctgtctctgctgtcaataagataaaggaagccttg
aatttgatgagaaaccacctatttgaggtgcctttcattgccaactacagaaaagagtac
attgaaccagaactgaatattgaggacttgtggaaagtgtgggcgtgggatgagaagtgg
agtcaattgcgcacgcgcaaggacaaccttcatcgcttattccaagaaatgcaggattat
cagtttcacactattcaagagaatggagaccagcctttagatgagaatacgagaattttg
caggctgaggatattgataggttggatgcagttgagagtatggagcagcttaaagatgtt
tacagccattttatgttgtactacaagaatgacatttctgccatgtgggaagcaaagaag
aaaagaaagcaagctgaaggcgatacagctgatggggaaaccaacgctactctatcaaag
cagaaaatgccagccaaacgagatctttataccatttgtagacatgcaggcgtcagtggc
ctggccagaaagtttgggttgactccggatcagtttggcgagaatttgcgtgacaactat
cagaggcatgaaacccagcaacatcccatggaaccagaggacacagctgagagttacctc
agcagtacattctccactgtcattgaagtcctggaagctgctcagcatatggtggccatg
cagattgcaagggatcctttggttcgccagtgcgtcaggcaaacattctatgagagagcg
aagctaaagataaaaccgaccaagaaaggaaagaaggagatcgacgagtcacacgcatgc
agtccttttaagtacgtgaaaaacaaaccagtcagggacctcgtcggtgatcagtttctg
cgcatgtgcaaagcagaagaagatggattgttgaccatttccatcaccatcgacttggat
aaaaatgccggttaccacacgtactttgacgaagtgaagcagttatactaccgagacgag
ttcagtcatttggttcaggagtggaacactcagaggatgaatgctttggctcgagccttc
aaccagatgctttatccactcttcgagaaagaactcaaacttaaactgctggaggaagcc
aaggcttctgtgatagatgcatgctgtcgccgactgaagtcatggattgaagtggctccg
taccaaccggaacagcatgttgaggaacaagagtttgatgacagcgttaactcggaggga
ctgcgcgtgttggcttgctcgatttcgcccaatccagacacaccagccttccttgccatg
ttggacggcggagggcaagtgaatgactacctgaggctcagatatctattgaatagaagg
aataccaacaaagccaaggaacgagaagataaggaaaaggatcttacgacattgaagcag
tttatcctcaagaaacgaccgcaggttattgtcgttgccgcagaatgccgagaggcgata
gctgtcgtagatgatatgaaaatgtgcatcgcagaactggagcaggaaaatcagattcca
tctataccagtggaagctttggacggcgaagtggcccgggttttcatgggttctccaagg
tcggagaatgagtttcgtgagtacccacccctcctgcgtcatgccgtgtctcttggccgc
agaatccaggatccactgtccgagttcgctgctctgtgtgttgaggaagatgaactcttg
tgtttgaggctgcatcctttccaggatcacgtagccaaagagcagctggtcaaatgtctc
catcaggaatttgtgacggttgtcaatgacgtaggtgttgatccaaaccgactgctggaa
catccgcatactgttgcgctgctgcagtttgtgtgtggcctgggtccaaggaaagcttct
tttctgctgaagagccttcgccagcagtgtaccagactggaaaaccgctcgcagctggtg
accgtgtgcggtctgggtcctcaggtgtttctcaactgtgcagggttcataaagattgac
acatcagccatcagtgactcaaccaccaattacatcgaagtgcttgatggctccagggtg
catcccgagacttatgaatgggccaagaaaatggctgtcgatgcacttgaatatgacgag
gcaacgatggagtccaacccttcgtcagctttggaggaaattcttgaaactccggacaga
ctgaaagacctggatttggacgcgtttgcggaagagctggagcggcagggttatggcaac
aaacgcattacattgtacgatattcgtgatgaacttttcggtcagtaccgtgaacggcgt
ctaccgtatcgcgcactgacggtcgaggagcgcttcagactcttgacaggcgagacgagt
gagacgctctatgtcggcaaaatggtggtgtgtggcgtgacagggttcgccaataggaag
ccaccgcgcgacatgatagatcaagcgcaacctgtcagaaacgaagagaccggacaatgg
cagtgtcctttctgtctacaagacaccttcccggatctaagcgaggtgtggacccatctt
gataacggtagctgtcctggtcaggccattggcgtgcgcacgagattggagaacgggctg
tcgggatttatcccgaccaagatgattagtgataagcgtatcagcagtccacgtgacaga
gtcaaggtggggatgaatctgcactgccgtgtgacacgtataaatatggagagactgcag
cttgacctgacatgccgctcatcggaccttttagacaaggaaggaaaatacagtcctcta
aaggacaagtatttcgatgaggatgccgcagatgttgacaagaaagaagaagaagcggca
aaaaagaaagcgaataggccaaaatacgtgaagcgtgtcatcgtacatccgtcgtttaaa
aacatttccttcaaggaggctgagagattgttggctgaaatggagcaaggagaatgtatt
gtgagaccgagcagtaagggtgctgatcatctgaccgtcacgtggaaggttgatgaaggt
gtttaccagcacgtggatgtgcgcgaggagggcaaagaaaacgctttcagcctcggccgc
tcattgtggattgacagcgaggaattcgaagatcttgacgaaataatcgcacgccatgtc
cagccaatggcttctttcgctcgagaaattcttaatcacaagaactatcgcgcagtggac
ggaaataagacgaagctggaagaaatccttcttgctgagaaacggaaagccccgcagaga
atcccatacctgttgagtaccaccaaagacttccctgggaagtttttcctgggttatctt
ccccgtgttaaggcccgtgtggagtatgtcagtgttacaccggatgggttccggtatcga
ggtcgggtgcatgccacgttgaatggcctgttcaaatggttcaaagagcatttccgagac
ccaatacccggcactcctcgccagcgaatgccggtggcaatgtccgagagtaacacaccc
tacacgcccggaggtaccccatccatcaacgtggatgttgaccctgcacgacttgtacct
cagttgcagcagcatttcccgcggggaattgctgaccccaaggtttactcagcggcgcta
gcggcagtgaggcaacggcaagagtcacaaaagaaaacaccgacgcaactcacacctgcg
caatggggagcggccgctgcgcagcatatccagcgacagaacaaacagcgcgcgcagcaa
acgcccacgcaagagactccaacgcaacaggggtaccagcaattcccacagtacggatac
tatcaacagcatcaggaccagagccagactccaacgtatgggtaccaacagacttactct
ggcaagaagtccagttcaaaggaaggcagcaaaagtcgatag
DBGET
integrated database retrieval system
