Acropora muricata (staghorn coral): 136914482
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Entry
136914482 CDS
T11512
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
amua Acropora muricata (staghorn coral)
Pathway
amua03018
RNA degradation
amua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136914482
09123 Folding, sorting and degradation
03018 RNA degradation
136914482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amua03019
]
136914482
03041 Spliceosome [BR:
amua03041
]
136914482
Messenger RNA biogenesis [BR:
amua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
136914482
mRNA degradation factors
5'-3' decay
Lsm complex
136914482
Spliceosome [BR:
amua03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
136914482
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
Motif
Other DBs
NCBI-GeneID:
136914482
NCBI-ProteinID:
XP_067037276
LinkDB
All DBs
Position
4:join(1670615..1670620,1670718..1670805,1671915..1671986,1672115..1672251)
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AA seq
100 aa
AA seq
DB search
MATDRKKKESIFELSKFLDKIVRVKFQGGREATGVLKGYDALLNIVLDNTTEYLRDPDDP
FKLTDETRQLGLAVCRGTAVVLVCPAEGMEPITNPFLQQE
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagacaggaagaaaaaagagagcatttttgaattatctaagtttcttgataag
atagtccgagtgaagtttcaaggtggtagagaagctacaggggtattgaaaggttatgat
gccttgctgaatatagtattggacaacactacagaatatttgagagatccagatgatcca
ttcaaactcactgatgaaacaagacagcttgggttggctgtctgccggggaacagctgtg
gtcttggtttgtcctgcagagggaatggagcctattacaaatccatttttgcagcaagaa
tga
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