Acropora muricata (staghorn coral): 136916220
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Entry
136916220 CDS
T11512
Name
(RefSeq) TBC1 domain family member 1-like
KO
K17902
TBC1 domain family member 4
Organism
amua
Acropora muricata (staghorn coral)
Brite
KEGG Orthology (KO) [BR:
amua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amua04131
]
136916220
Membrane trafficking [BR:
amua04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
136916220
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
136916220
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
136916220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
TBC1D_hel
DUF3350
PID
PTB
CENP-F_leu_zip
ADIP
CC_Bre1
CCDC89
BRE1B
CCDC186_middle
T4SS_LegC2C7
CCDC122
CCDC-167
V-SNARE
Motif
Other DBs
NCBI-GeneID:
136916220
NCBI-ProteinID:
XP_067039565
LinkDB
All DBs
Position
5:complement(29606196..29625413)
Genome browser
AA seq
1275 aa
AA seq
DB search
MDAGSEGEPKNEERQLRLRSKSTPTGTNQFTMSNSLDSGVGSFDESDLSEKSCMKNDYQS
EKSRMEERSTAKGLLHQGASSFRFIYLGSAVLDKRYTQAMLPWVIAEVRRKKERVSIVLN
VEAMTVKAIDGSGNTLFQHEVQIITRCALSVDKKCFSYLTKVSGDVSSCQSYVFEAVEPS
SVNGFLQGIRDAAKQGVDQSTLTAKENGVEDSSSPINNSSLDSQAETSSENLAVIFPLWY
MGKVMVSHRQAPPTLIDDLVERFHKRLGMSDSEKQMRVTKEEQRVASPCPDVNMESHGRE
RLLAKASSFDSAQILQEEPKIAEEKTEELASSRMQLLSANSNSGGRPRSASDGDKMKELY
SSKVHGNSSNQHCGTSMQTRHSSHHAGENRNVLFKVTVHSLSCLSVTTKQQLMERRLREV
SFCQQGSKSPEHFGFICHDSRSGQYNCYVFKGQSEQLVDDVMQSLRQAFNSAWQAAGPSA
VCDMCPLHQLHQLCVQLDGRTVKQQYDILQRHRINLTDEEMSEFTEIFKAESPAPGMSEE
NEVIMAIFRGIYEQRQKQHTHIGQGNPNQKNREGSNLLQKAKKSLSSSFGSFMSKRGKPR
TIEEVNEMEKCESEKLSPTILRRRSATVDTVAHSAHTQPVTPLKESSSHKEDEVLTSTPH
KHAKQVPPLQAGEGSPSHLSKKPSGSTSSPPSTPTKTPQGHHRRLSRHNSYGYRQAIFHS
VVTPSKKETAISDQDLGVVPQSASWAEMVGRSRSAAELRALWRKAIMEQILLIRMEKENT
SLEVNVNEIETNQLKLSYKEISPCSESAATNWKTILEKGDVPVDKRVLLDAVKAGVPKTR
RGEIWRFLAKQHEFYSPLPEYKPWMQKSFEELKEVSSSHQHSIFIDLGRTFPSHPYFAAQ
LGRGQLCLFNVLKAYSVLDEEVGYCQGLSFVAGILLMHMREAEAFDMLRFILYTLQVRTQ
YKPDMQKLQTQFYMLSRLFHDYYKPVYEFLLECEISPTLYAAPWFLTLFASHFPIGFVVR
VLDMMFLQGMEVIFKVILLLLGSCQEELLASDGLEGAVEVIKLSVPPFAEEHVEWLVDKA
LSLDVSKDLESYEVEYCVFKEEDLSVTEFEDIESEKVECLEAELEIKAKQIQHLNEQLSS
ARHAIDGLESTINTMQINQTELLSFIRSLKAENESLKKNFEKLKDKVLANGDVAPEVAEV
DEEETIEDSLTDCKPTCAEMNASFTEENTDSFEHIGSAEDLSDHEAVDEIHEERTDATGT
ALALSNKCDDLVVSR
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagggtcggaaggggagccaaagaatgaggaaaggcagctacgtttgcgttcc
aaaagcactccgacaggtacaaaccaatttaccatgtctaattcgctagacagtggtgtt
ggaagcttcgatgaatcggacttatcggaaaaatcgtgcatgaaaaatgactatcaatca
gagaaatctcgcatggaggaacgatcgaccgctaaaggccttctacatcaaggagcgagc
tctttccgtttcatctacctcggttctgcagtgttggacaaaagatacactcaagcgatg
cttccgtgggttatcgcagaggtcaggagaaaaaaagagcgagtttcgattgttttgaac
gtcgaggcaatgacagtgaaggccatcgatggttcaggcaataccttgtttcaacacgaa
gtgcagataatcactcgctgtgctctctctgtggacaagaaatgcttttcctacctgacc
aaggtttctggtgatgtttcttcttgtcaaagttacgtttttgaggctgttgagccgagc
tcggtgaatggttttctgcaaggcatccgtgatgctgccaaacagggtgttgaccagagc
actctaacagcaaaggaaaatggagtagaggattcatcgtcacctataaataacagcagc
ttagattcacaagctgagacgtctagtgaaaacttggcggtgatttttcctttgtggtac
atgggtaaggtaatggtgtcacataggcaagctccacccacactgatagatgatttggtt
gagagatttcataagagactggggatgtctgactcagagaaacaaatgagagtgacgaaa
gaagaacaaagagtggcttcaccttgcccagatgtcaacatggagagtcacggtagggag
cgtcttctggcaaaggccagcagttttgatagtgctcaaatattgcaggaagaaccaaaa
attgctgaagagaagactgaagaacttgctagcagtagaatgcaacttctgagtgccaac
agcaattctggtggtcgtccaaggtcggcgagtgacggtgacaaaatgaaagagctgtac
tcttcaaaggtccatgggaactctagcaaccagcactgtggcactagcatgcaaaccaga
cattctagccatcacgcaggagaaaacaggaatgttctgttcaaggtcaccgttcactca
ttgtcttgtctgagtgtgacgacaaagcaacagctaatggagaggaggttgagagaagtg
tctttctgtcagcaggggtctaagtcgccagagcactttggtttcatttgccatgattca
aggagtggacagtacaactgctatgtgttcaagggacagtctgaacaactggtggatgat
gttatgcagtcacttcgacaagctttcaactctgcttggcaggcagcgggtccatcagct
gtttgtgacatgtgcccgctccaccaacttcatcaactttgtgtccaacttgatggtcgc
acagtgaaacaacagtacgacatactgcaacggcacagaatcaatctgacagatgaggag
atgagcgaatttacagaaatttttaaagctgagagtcctgcacctggcatgagtgaggag
aatgaagtcattatggccatctttagagggatatatgaacaacggcaaaagcagcacaca
cacattggccagggcaacccgaatcagaaaaacagggagggatcaaatctgcttcagaaa
gccaagaaatctttgtccagctcctttggaagtttcatgagcaaaaggggaaagccccga
acgatagaggaagtaaatgaaatggaaaagtgtgaatcagaaaaattgtcaccaacaatc
ctcagaagacgcagtgcaactgttgatacagttgcacactcagcacacactcagcccgtg
acccctctcaaagagtcttcctcacacaaagaagatgaggtactcaccagtactccccac
aaacatgcgaaacaagtccctcccctgcaggcgggggaaggcagtccatcgcacctcagc
aagaagccatcgggttcaacttcaagtccaccgtcaactccaacgaaaacacctcagggt
caccaccggagactcagcagacataattcctatggatacagacaggcaatttttcatagt
gtggtcacgccgtccaagaaggaaactgccatttcagaccaagacttgggcgtggtacct
cagagtgcctcgtgggcggaaatggtggggcgtagtcgatcagcggcagagctgagggca
ttgtggaggaaagccatcatggagcagattttgcttatcaggatggaaaaagagaacact
agtttggaagtgaatgtcaacgaaatcgagaccaaccagctgaagctttcttacaaggaa
atctcgccgtgctctgaatctgcggcaacaaactggaagacgatcctcgagaagggagat
gttcctgttgacaaaagagtgttgcttgacgcggtcaaagctggtgtgccaaaaaccagg
aggggagaaatctggagatttttggccaagcagcacgagttttattcaccactgcctgaa
tacaagccatggatgcaaaaatccttcgaggagctgaaggaagtgtcttccagtcaccag
cactccatatttattgacttaggtcgcacattccccagtcacccatattttgccgcccag
ctgggtcgtggtcaactctgtttgttcaatgtcttaaaagcttactccgtattggacgaa
gaagttggatactgtcaggggctgagcttcgtggcagggattctgttgatgcacatgagg
gaagctgaagcatttgatatgctgaggtttatcttgtacactctgcaggttcggacgcag
tacaaacccgatatgcaaaagctacagactcagttctacatgttgtccaggctttttcac
gactactacaaaccggtttacgaatttcttctggagtgtgaaatttctcctacactttat
gctgccccgtggttcctcacgctctttgcgtctcacttcccgataggctttgttgtacga
gtgcttgacatgatgttccttcaagggatggaggtcatattcaaggtcatcttgttgctg
ctcggctcttgtcaagaagagttgttggccagtgatggcctggaaggcgcggtggaagtt
atcaaattgtcagtgcctccctttgcagaagagcatgtcgagtggcttgtagataaagcg
ctttctcttgatgttagcaaagatctggagtcatatgaagttgaatattgtgtgttcaag
gaggaggatctgagtgttactgaatttgaagacatagaaagtgagaaggtggaatgtctc
gaggctgaactagaaatcaaagcaaaacagattcaacatttgaacgagcagctgtcatct
gcgcgacacgcgattgatggacttgaaagcacaattaacacaatgcaaatcaatcagacg
gagttactgagtttcatacgatcgctgaaagccgagaacgaatccctgaaaaagaacttt
gaaaaactcaaagataaggtgcttgccaatggcgacgtggcgccagaagttgccgaagtt
gacgaagaggaaacgattgaggattcattgaccgactgcaaaccgacgtgcgccgaaatg
aacgcaagctttaccgaagaaaacacggacagtttcgagcatattggcagtgcagaggat
ctttctgaccacgaagccgtggacgagatccatgaagagaggactgacgcgacgggaacc
gcactcgctctgagtaacaagtgcgatgacctggtagttagtagataa
DBGET
integrated database retrieval system