Acropora muricata (staghorn coral): 136931200
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Entry
136931200 CDS
T11512
Name
(RefSeq) THO complex subunit 3-like
KO
K12880
THO complex subunit 3
Organism
amua Acropora muricata (staghorn coral)
Pathway
amua03013
Nucleocytoplasmic transport
amua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136931200
09122 Translation
03013 Nucleocytoplasmic transport
136931200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amua03019
]
136931200
03041 Spliceosome [BR:
amua03041
]
136931200
Messenger RNA biogenesis [BR:
amua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
136931200
Spliceosome [BR:
amua03041
]
Complex C
Other components
EJC/TREX
136931200
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
136931200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_NOL10_N
Beta-prop_Vps41
eIF2A
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
DSE1_N
WD40_RFWD3
RMC1_N
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Tricorn_2nd
Beta-prop_TEP1_C
PD40
Beta-prop_EIPR1
TRM82_WD
CFAP251_N
Beta-prop_WDR75_1st
PAC11
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
Beta-prop_ACSF4
Beta-prop_DCAF12
Beta-prop_WDR41
Beta-prop_Nup120_160
Beta-prop_ELP1_1st
DPPIV_N
JLPA
Motif
Other DBs
NCBI-GeneID:
136931200
NCBI-ProteinID:
XP_067056745
LinkDB
All DBs
Position
10:complement(27536241..27545288)
Genome browser
AA seq
321 aa
AA seq
DB search
MAPGDYLNEMKRYFENNSRTKDFIAHTAKVHSVAWSCDGRRLASGSFDRTVSIFVLEKDR
LTKETNHKGHGESVDQLCWHPSSSNFLVTASGDKTIRIWDARASKCVSVVNTKGENINIC
WSPDGNTIAVGNKEDLITFIDARTYKARCDEQFKYEVNEISWNNTNDLFFLTNGHGCINI
LSYPDLKLQQTLHAHPANCICIKFDPKGRYFATGSADALVSLWDLDELVCVRTFSRLDWP
VRTLSFSHDGEMLASGSEDLIIDIAMVETGERICEVQCNAPTFTVAWHPSKPLLAFACDD
KDKHDRDAGTVRLFGFGTNSS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgggagactatctgaacgagatgaaacggtattttgaaaacaactcaagaacg
aaagactttatcgcccacacagccaaggttcattctgtagcttggagttgtgacggcaga
agactcgcttcaggctcatttgacagaactgttagcatttttgtgttggagaaggaccgt
ttaactaaagaaacaaatcacaaaggccatggagagagtgttgatcaactttgctggcat
ccaagtagctctaattttctagtgacagcatctggtgataaaacaatcagaatatgggat
gccagagccagcaagtgtgtatctgttgtaaatactaaaggagaaaacataaatatttgt
tggagccctgatggtaatacaatagcagttgggaacaaggaagatctaataacatttata
gatgcaagaacctataaagcaagatgtgatgaacaattcaaatacgaagtgaatgaaatc
tcttggaataacacaaatgacttattttttctaaccaatggacatgggtgtattaacata
ttaagttatcctgatttaaagctccaacaaacattacacgctcatcctgccaactgcatt
tgtataaagtttgatcccaaaggaaggtattttgcaactgggagtgctgatgcattggtt
agtctatgggacttagatgagctggtttgtgtcagaacattttcaagacttgactggcca
gtacgaacactaagctttagtcatgatggtgagatgctagcatccggctctgaggatctt
atcattgatattgccatggtagaaactggcgagagaatatgtgaggtacagtgcaatgca
ccaacgttcacagtagcttggcatccttcaaagcctctgttagctttcgcttgtgatgat
aaggataaacatgatcgagatgccggcacagttcgtctctttggcttcgggaccaactcc
tcctga
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