Aeoliella mucimassa: Pan181_14380
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Entry
Pan181_14380 CDS
T06952
Symbol
rpoA_1
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
amuc
Aeoliella mucimassa
Pathway
amuc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
amuc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Pan181_14380 (rpoA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amuc03021
]
Pan181_14380 (rpoA_1)
03400 DNA repair and recombination proteins [BR:
amuc03400
]
Pan181_14380 (rpoA_1)
Enzymes [BR:
amuc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Pan181_14380 (rpoA_1)
Transcription machinery [BR:
amuc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Pan181_14380 (rpoA_1)
DNA repair and recombination proteins [BR:
amuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Pan181_14380 (rpoA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
TPR_2
TPR_1
TPR_19
TPR_6
TPR_16
TPR_14
TPR_8
TPR_12
TPR_17
ANAPC3
TPR_11
TPR_CcmH_CycH
Paf67
Coatomer_E
HAT_PRP39_C
Radical_SAM_2
HEAT_Nup120
MIT
Motif
Other DBs
NCBI-ProteinID:
QDU55251
UniProt:
A0A518AKJ6
LinkDB
All DBs
Position
1724856..1726187
Genome browser
AA seq
443 aa
AA seq
DB search
MSMTQAPSAGIKSMVVSSTGFGPREIEEITHAISENYANYRELKEGVQDLEAQPNRSPAA
SARLGVCQYLLGRYSDAIETLKHSDGGALTHYYLGRSYLALDRYSEAVESYDASQRAGYD
RDIVTLAKAEALRYSKQPEESLKLLDTLSGAVEQTAEYLYQRSATVQVLGAPRVEVLALL
ERAVQADPSHGGSLFGLALENDRHGNDDYARELYERAAKQFPTYVGTLLNLGILYEDMQA
FDRAKQCYNRILDMFPNHKRARLYFKDADASRDMYYDEEARREQDRLSQVLSIPVTDFEL
SVRSRNCLQKMGLMTLGDLTETTELELLSSKNFGETSLVEIREMLTSKGLDLGQFAHQRR
EEDPPYDPESLSDDERALLDRPISDLNLSVRARKCMVRLGLTTIGELVRRTGDDLLECKN
FGVTSLNEVREKLTQANLKLRGD
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgactcaggcaccgtctgccggaatcaagtcgatggtggtttcgtccactgga
ttcggaccccgtgagattgaggaaatcacccacgccatctccgagaactacgccaattat
cgcgagctcaaggaaggcgttcaggatctcgaagcacagccaaaccgctcgcccgctgcg
tcggcgcgattgggcgtgtgccagtatttgctgggtcgctattccgacgcgattgaaact
ctcaagcacagcgatggtggtgccctgacgcactactatctgggtcgctcgtacctggcc
ctcgaccggtacagcgaagcggtcgaatcgtacgacgcctcgcaacgggccggctacgat
cgcgatatcgtcaccctggccaaggccgaggccctgcgatactcgaagcagccggaagag
tcgctgaagctgctcgatacgctttcgggcgcggtggagcaaaccgcagagtacttgtac
cagcgttcggcaaccgtgcaggtgctcggtgctccccgcgttgaggtgctcgcgctgctc
gagcgtgcggtgcaggctgatccctcgcacggcgggtcgctgttcggcctggcgttggag
aacgatcgccatggcaacgacgactacgcccgggaactctacgagcgggctgccaagcag
tttccgacttatgtcggcacgctgttgaacctcggtatcctgtacgaggatatgcaagcg
ttcgaccgtgcgaagcagtgctacaaccgcattctcgacatgttccccaaccacaagcgt
gcccggctgtactttaaggacgccgacgcttcgcgggacatgtactacgacgaagaagcc
cgccgcgagcaggatcgcttgagccaggtgctcagcatcccggtgaccgacttcgaattg
tcggtgcggagccgaaattgcctgcaaaagatgggcttgatgacactcggggatctgacc
gagaccactgagctcgaactgctttcgagtaagaactttggcgagacttcgctggtcgaa
atccgcgaaatgctcacttccaaggggctcgacctggggcagtttgctcaccaacgccgc
gaagaggatccgccgtacgatcccgaatcgctcagcgacgacgagcgggcgctgctggat
cggccgatatccgacctcaacctgtcggtgcgtgcccgcaagtgcatggttcgtctgggt
ctcaccacgattggcgagttggttcgtcgcaccggcgacgacctgctggagtgcaagaac
ttcggcgtgaccagcttgaacgaagttcgcgagaagctgacgcaggccaatctcaaattg
cgtggtgactga
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