Aeoliella mucimassa: Pan181_32840
Help
Entry
Pan181_32840 CDS
T06952
Symbol
sigA_3
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
amuc
Aeoliella mucimassa
Pathway
amuc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
amuc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Pan181_32840 (sigA_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amuc03021
]
Pan181_32840 (sigA_3)
Transcription machinery [BR:
amuc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pan181_32840 (sigA_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
WHEP-TRS
Motif
Other DBs
NCBI-ProteinID:
QDU57070
UniProt:
A0A518AQR2
LinkDB
All DBs
Position
complement(4034947..4036587)
Genome browser
AA seq
546 aa
AA seq
DB search
MTPHLDQDLQALLGVAKEQGFLTYEQVGTYLPDETYGTEPVDQLLSALDSMGIEIVDDPN
VRKFSDVVAAATQSEGKQLPDAGPHYSSDPIRMYLSQMAEIPLLTREEEIAMAKKIELTR
KRFRRNLLRSFHALEATVKTLERVQSGELPFDRTIKVSLTEHLTKEQVQGRMPGNLATLR
SLMEAQKADFEQLTRRTLSSEDRRVVRRRFLRRREKMLILVEELSLRTRRVQPLIKELEQ
YSQRIDLVRDQLRELKADDAPSDKIDSVKAELKALLMNVCESPASLRRRVALLKEQYRAF
EGVKRDLSSGNLRLVVSIAKKYRNRGLSFLDLIQEGNTGLMRAVDKYEYRRGFKFSTYAT
WWIRQAITRAIADQARTIRIPVHMIDVLTKLRNTSKMLQQKLGREPSIEEIATAAEVPLD
ETERVLDIGRHPVSLDRPIGDGEDCSFGEFVEDQHTESPHKLANNGLLRDQIEELLKTLT
FREREIIRLRYGLHDGYSYTLEEVGRIFKVTRERVRQIEAKAVAKLQHPVRSQMLASFVP
QLPVAA
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaccccgcatctcgatcaagatctgcaagctctgcttggtgttgccaaagagcaaggc
tttctcacttacgaacaagtcggtacctatctgcccgacgaaacctacggcaccgagcca
gtcgatcaattgctgtcggctttggactcgatgggcatcgaaatcgtcgacgatcccaac
gtccgcaagttctccgacgtcgttgccgcggccacccagagcgaaggcaaacaactgccc
gacgctggcccgcactactcgagcgacccgattcgcatgtacctttcgcaaatggcagag
atcccgctgctgacgcgtgaggaagaaattgcgatggccaagaagattgagctgactcgc
aagcgtttccgtcgcaacctgctgcgttcgttccacgcgttggaagctaccgtgaaaacg
ctggaacgcgtgcaatcgggcgagctgcctttcgatcgtacgattaaggtgtcgctcacc
gagcacctgaccaaagagcaagtgcagggtcgcatgcccggcaacctggcgacgctccgc
tcgctgatggaagcccagaaggccgacttcgagcaactgactcgccggacgctgtcgagc
gaagatcgtcgcgtagtgcgtcgccgcttcctgcgtcgtcgcgagaagatgctgatcctg
gtcgaggagctgagcctgcgtactcgccgggtgcagccgttgatcaaggaactcgaacag
tacagccagcggatcgacctggtacgcgaccagcttcgcgaactgaaggccgacgatgct
cccagcgacaagattgattcggtcaaggcggagctgaaagccttgctaatgaacgtgtgc
gaaagccctgcttcgctgcgtcgccgagtcgcgctgctcaaagagcagtaccgggctttc
gaaggggtgaagcgcgacctgtcgagcggtaacctgcgtctggtggtgtcgatcgccaag
aagtatcgcaatcgcggtttgtcgttcctcgatctcatccaggaaggcaacaccggcctg
atgcgtgcggtcgacaagtacgaatatcgtcgcggtttcaagttcagtacctacgcgact
tggtggattcgccaggcgattacccgagcgatcgccgaccaggcccgcaccattcgcatt
ccggtgcacatgatcgacgtgctgaccaagctgcgtaacacctcgaagatgctgcaacag
aaactcggccgcgagccttcgatcgaagagattgcgaccgcagcggaagtaccgctggac
gaaaccgaacgcgtgctcgacataggtcgtcaccccgtgagcctcgatcgcccgatcggc
gacggcgaagactgcagcttcggcgagttcgtcgaagatcagcacaccgagagccctcac
aaactcgcaaacaacggcttgctgcgggatcagatcgaagagctgctgaagaccctgacg
ttccgcgaacgagaaatcattcgcctgcgttacggcctacacgacggctacagctacacg
ctcgaagaagtcggacgcatcttcaaggtcacccgcgaacgcgtgcgtcagatcgaagcc
aaggcggttgccaagctgcaacacccggtccgtagccagatgctagcgagctttgtgccg
caactgccagtggccgcctaa
DBGET
integrated database retrieval system
