Aeoliella mucimassa: Pan181_43770
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Entry
Pan181_43770 CDS
T06952
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
amuc
Aeoliella mucimassa
Pathway
amuc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amuc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pan181_43770 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amuc03019
]
Pan181_43770 (rhlE)
Enzymes [BR:
amuc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Pan181_43770 (rhlE)
Messenger RNA biogenesis [BR:
amuc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Pan181_43770 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QDU58150
UniProt:
A0A518ATU7
LinkDB
All DBs
Position
complement(5347131..5348978)
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AA seq
615 aa
AA seq
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MKFTELGLAEPFLRALEKLGYEEATPIQAAAIPMILAGRDVIGCAQTGTGKTAAFTLPML
DRLLQTLPPKPEGHKPEKPKHKGPKGSKGANPRPRVLKSLVLSPTRELAAQISESLKKYG
RHTPLRHCVVFGGVSQLHQVRALRHGVDSLVATPGRLLDLIGQGHIDLSQIEILVFDEAD
QMLDMGFLPDLKRIVSMVPEERQTLMFSATMPTEIRRLAEQWLTDPESVEVAPVATPAER
IAQSVRMVEKKEKPDELARFLKETPRSRTLVFSRTKHGADKIVKRLERDGLRAAAIHGNK
SQGARTRTLERFKGKNPPILVATDIAARGLDIRDVSHIVNYDLPEAPETYVHRIGRTARA
GAEGVAISYCARDERRYLFAIERLMKTRIAVHGENGEELEPARPMKEQSHSNRQQNGGQG
GGRPQRGGNSSRPKRKRPFRKSGQFGGSGGQSEGRRGERSGERGPRSEYGQRSERSGERD
SRSECGQRSERGDRGQRGENGERTGQRGERTDRNDRGPRGENGERTERGPRNGKPGGKPG
FKSGFKSGARSGGKPGATSRGNSSGGGNGAKAGGRPGGKPGGKPGAKSGAKAGGKPWGNK
GKFKSKGRKPQTAAN
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaccgaacttggcttggccgaaccgtttctccgtgccctcgaaaaattgggc
tatgaagaggccaccccgattcaagcggctgcaattccgatgatcctggccgggcgcgac
gtgattggttgcgcccaaaccggcaccggcaagaccgctgcgttcacgctgccgatgctc
gatcgtttgctgcagacgttgccaccgaagcccgaggggcacaaacccgaaaagccgaag
cacaaaggtccgaagggatcaaaaggggcgaacccacgcccacgcgttctcaagtcgctg
gtgctgtcgcctactcgcgagctagctgcccagattagcgagagcctgaagaagtatggt
cgccacactccgctacgtcattgcgtggtgtttggcggcgtgtcgcaactccaccaggtg
cgggcgctgcgtcatggggtcgactcgttggttgcgactcccgggcggttgctcgacctg
attggccaagggcacatcgacctgtcgcagatcgaaatcctggtgttcgacgaagccgat
cagatgctcgacatgggcttcctgcccgacctcaagcgaatcgtgtcgatggtgcctgag
gagcgtcagacgctgatgttctcggcaacgatgccgacggagattcgccgcctggcggag
caatggctgaccgatcccgagagcgtggaagtcgctccggtagcgactcccgccgagcgg
attgctcaaagcgtgcggatggtcgagaagaaagagaagcccgacgagctagcgcggttc
ttgaaagagaccccgcggagtcgcacgttggtgttcagtcgcacgaagcatggtgccgac
aagatcgtcaagcgtttggaacgcgacggacttcgcgcggccgccattcatggcaacaag
agccaaggagcccgcacccgtacgctcgaaaggtttaagggtaagaatcctccgattctg
gtggcgaccgacattgctgcccgcggtttggacattcgcgatgtttcgcacattgtgaac
tacgatttgccagaggcccccgagacctacgtgcaccgcattgggcggactgcccgggcg
ggtgccgaaggggtagcgatttcgtactgtgctcgcgacgagcgacgttacttgttcgcg
atcgaacggttgatgaagacccgcatcgcggtgcatggcgagaatggcgaagagctggaa
cctgcccgcccgatgaaggagcagtcgcactccaatcgtcagcaaaacggcggccaaggt
ggtggacgcccacaacgcggcggcaactcctcgcgtccgaagcggaagcgtccgttccgg
aagtccgggcagttcggcggttccggcggtcagtcggaaggacgtcgcggcgaacgttcc
ggcgaacgcggtccgcgtagtgagtacggtcaacgcagcgaacgatccggcgaacgtgat
tcacgtagtgagtgtggtcaacgcagcgaacgtggtgatcgtggtcaacgcggagaaaac
ggtgaacggaccggccaacgtggcgagcgtaccgatcgcaacgaccgtggtccacgcggc
gaaaacggcgaacgcaccgaacgcggtcctcgcaacggcaagccaggcggaaagcccggt
ttcaaatcgggctttaagtcgggcgcacgctccggtggtaagccgggtgccacgtcgcgt
ggcaacagctccggcggcggcaatggtgccaaggctggtggtcgtcccggtggcaagcct
ggtggtaagcctggagccaagtccggcgcgaaagccggcggcaagccatggggcaacaaa
ggcaagttcaagtcgaagggccgtaagccgcaaacggccgccaactga
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