Aeoliella mucimassa: Pan181_51210
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Entry
Pan181_51210 CDS
T06952
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03086
RNA polymerase primary sigma factor
Organism
amuc
Aeoliella mucimassa
Pathway
amuc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
amuc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Pan181_51210 (sigB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amuc03021
]
Pan181_51210 (sigB)
Transcription machinery [BR:
amuc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pan181_51210 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
HTH_23
HTH_28
HTH_29
HTH_11
HTH_7
HTH_17
CENP-B_N
Mor
HTH_Tnp_ISL3
MerR
DUF3853
HTH_Tnp_4
KORA
AbiEi_4
MerR_1
HTH_DeoR
DUF6047
Motif
Other DBs
NCBI-ProteinID:
QDU58881
UniProt:
A0A518AW16
LinkDB
All DBs
Position
6220177..6221850
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AA seq
557 aa
AA seq
DB search
MHRHYQSDAIRRLRDQQVRYAPRAKRLQQVEAAEHLIADTVADKTYTYEYVCYRVTGYRP
DANNEDAKQQMQGEDLLHDLRLLVEDLSDSIDLDAEAVGEQVLTVEQLARQFNVSTKTIS
RWRELGLVSRRFVFDGRKRVGFLRSSVDRFVKNNGKRVSRGARFSQLTDEQRNEIIAGAR
RLASGGACQSEISRRLAERSGRSVETIRSTIRQFDKENPQMAIFPSAKLPITPAQKQRLF
QQYRRGMPIEKLMKQYGRTKTTIYRVINEIRVAEVMELPLDFIPNPRFSRKGADNACLGE
MPEADKPTRKAKMPSGLPPYLAALYEMPLLTREQEAHLFRKYNYLKFKASKLRDSLDPAN
PKATLLDDIEALYDRIVTTKNEIARANLRLVVSIAKRHVTPDQNFFELVSDGNMSLLRAI
EKFDFARGNKFSTYATWAIMKNFARTIPSEFKHRDRFRTSHDELFAATEESRANPMLAES
VQSHREQQIERILRRLDEREQKIIIGRFGLDHSQEPQTLKEVGAELGVTKERIRQIELRA
LSKLRQAAKEEKIALDL
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgccactatcaatccgacgctatacgacgcctacgtgaccagcaggtaaggtac
gccccgcgcgccaaacgcctgcaacaagtcgaggccgccgaacatctcattgccgatacg
gtcgccgacaagacctacacgtacgagtacgtgtgctatcgcgtcaccggttatcgtccc
gacgccaacaacgaagacgccaagcagcaaatgcaaggcgaagatctgctgcacgacctg
cggctgttggtggaagacctttcggactccattgatctcgatgccgaagcggtcggcgag
caagtgcttaccgtcgagcagctagcgcgtcagttcaacgtatcgaccaaaaccatctcg
cgctggcgcgaactgggcctcgtgagccgccggttcgtgttcgacggtcgcaaacgagtg
ggattccttcgcagcagcgtcgaccgctttgtgaagaacaatggcaagcgcgtttcgcgc
ggtgcccgcttcagccaactcaccgacgaacagcgtaacgagatcatcgctggcgctcgt
cgcctggcgagcggcggtgcctgccagagcgaaatctcccggcgactcgccgagcgttcg
ggtcgtagtgtggagaccatccgctcgacgatccgtcagttcgacaaagaaaatccacag
atggcaatcttccccagtgcgaagttgccaatcacccccgcgcagaagcagcgactcttc
caacagtatcgccgggggatgccgatcgaaaagctgatgaagcaatacggtcgcaccaag
accacgatctatcgtgtgatcaacgagatccgcgtggccgaggtcatggagttgccgctc
gacttcatccccaacccacggttcagccgcaagggtgccgacaatgcatgcctgggcgag
atgcccgaggccgacaagccgacccgcaaggcgaagatgccaagcggattgcccccgtac
ctggccgccctgtacgaaatgccgctgctcactcgcgagcaggaagcccacttgttccgc
aagtacaactacttgaagttcaaggcgtcgaagcttcgcgactcgctcgatccagccaac
cccaaggcgacgctgctcgacgacatcgaagccctgtacgatcgcatcgtcaccacgaag
aacgagattgcccgggccaacttgcgattggtggtctcgatcgccaagcgtcacgttacg
cccgatcaaaacttcttcgagctagtgagcgacggcaacatgtcgctgctccgtgcgatt
gagaagttcgacttcgcccgcggcaacaagttcagcacgtacgccacgtgggcgatcatg
aagaacttcgcccgcacgattcccagcgagttcaagcatcgtgatcgcttccgcacgagc
cacgacgaactgttcgcggccaccgaggaatcgcgggccaatccgatgctggccgagtcg
gtgcaatcgcatcgcgagcaacagatcgagcgaatccttcgccggctcgacgaacgcgag
cagaagatcatcattgggcgattcggcctggatcacagccaggaaccgcaaaccctgaaa
gaagtaggtgccgaacttggagttaccaaggaacgcatccgccagatcgaactacgggcg
ctcagcaaactgcgtcaagcagccaaagaagagaagatcgctctcgatctataa
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