Aquimarina muelleri: ACSTS3_04440
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Entry
ACSTS3_04440 CDS
T11519
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
amue Aquimarina muelleri
Brite
KEGG Orthology (KO) [BR:
amue00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amue03009
]
ACSTS3_04440 (rlmD)
Enzymes [BR:
amue01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
ACSTS3_04440 (rlmD)
Ribosome biogenesis [BR:
amue03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ACSTS3_04440 (rlmD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRM5-TYW2_MTfase
TRAM
MTS
Cons_hypoth95
Methyltransf_15
Methyltransf_11
PCMT
PrmA
Methyltransf_ANTKMT
N6_N4_Mtase
FtsJ
RrnaAD
Methyltransf_37
Methyltransf_4
Methyltransf_12
UPF0020
Methyltransf_2
Methyltransf_32
DUF8616
PEP_mutase
Motif
Other DBs
NCBI-ProteinID:
XYH67833
LinkDB
All DBs
Position
complement(1140719..1142128)
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AA seq
469 aa
AA seq
DB search
MARKNRRQIFEGVEVIDAGAKGKSIAKAPDGKVIFINNAVPGDIIDVQVTKKRKAFYEGS
ATTFHQLSDKRVDPTCKHFGTCGGCKWQFMGYEHQLAYKQKEIINNLTRLGKVELPEVSS
ILGSEDHFFYRNKMEFSFSDSRWLTLDEIKSDSEIKNRNALGFHIPGMWDKILDIDKCYL
QEDPSNAIRDKVKAFATENNFEFYNARNQHGFLRTLMLRISSTGEIMVLLQFFHEDVEKR
TLLLDYIGSEFPEITSLQYTINPKGNDTIYDQEVICYKGKDYIEEEMEGLRFRINAKSFY
QTNSKQAYELYKITRDFANLTGEELVYDLYTGTGTIAQFVAKNAKKVIGVEAVPEAIEDA
KENAKRNSITNVEFYVGDMKKVFTKSFIAQHGQPEVVITDPPRDGMHKDVVAQLIHIAPQ
KIVYVSCNSATQARDLALLDEMYKVTKVQPVDMFPQTYHVENVVLLEKR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaaaaaatcgaagacaaatctttgaaggcgtcgaagttattgatgcaggtgca
aagggaaaaagcattgctaaagcaccagatggaaaagttatatttatcaataatgctgtt
cctggtgacattatagatgttcaggtaactaaaaaacgtaaggcattttatgaaggttca
gcaactacatttcatcaattatctgataagcgagtagatccaacctgtaagcattttgga
acttgtgggggatgtaaatggcagtttatgggctatgaacaccaattggcatataagcaa
aaagaaataataaataatttaaccagactaggtaaagtcgaattacccgaagtaagttct
atactaggctctgaagatcattttttctacagaaataaaatggagttttcctttagcgac
agtagatggttaacccttgatgaaattaaaagtgattctgaaattaaaaacagaaatgca
ttaggatttcatattcctggtatgtgggataaaattttagatattgataaatgttatctt
caggaagacccaagcaacgctattagagataaagtaaaagcatttgctacagaaaataat
ttcgaattttataatgcccgaaatcagcatggctttctacgtacattaatgcttcgaata
tcttcgacaggcgaaattatggttttattacaattttttcatgaagatgtagaaaaaaga
actcttttattagattatattggttctgagtttcccgaaataacttctttacaatataca
attaatccaaaaggcaatgacactatatatgatcaagaggttatttgctataagggtaag
gattatatcgaagaagaaatggaggggttacgttttagaattaatgctaaatctttttat
caaacaaattctaaacaagcatacgaattatataaaataaccagagattttgcaaattta
actggcgaagaattggtatacgatctatatacaggaactggtacaattgcgcaatttgtt
gctaaaaatgcaaaaaaagtaattggtgtagaagctgttcccgaagctattgaggatgcc
aaagaaaatgccaaacgtaattctatcactaatgtagagttttatgtaggagatatgaaa
aaggtctttacaaaaagttttatagcacaacatggtcaaccagaagtggtaattacagac
cctcccagagatggtatgcataaagatgtagtagcacagttaatacatatcgccccacaa
aaaatagtgtatgttagctgtaatagtgcaacacaagcacgtgatcttgcgttattagat
gaaatgtataaggttactaaagtccaacctgtagatatgtttcctcaaacatatcatgta
gaaaatgtagtattattagaaaaaagataa
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