Achromobacter mucicolens: PE062_01425
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Entry
PE062_01425 CDS
T08808
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
amui
Achromobacter mucicolens
Pathway
amui03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amui00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PE062_01425 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amui03019
]
PE062_01425 (recQ)
03400 DNA repair and recombination proteins [BR:
amui03400
]
PE062_01425 (recQ)
Enzymes [BR:
amui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PE062_01425 (recQ)
Messenger RNA biogenesis [BR:
amui03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PE062_01425 (recQ)
DNA repair and recombination proteins [BR:
amui03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PE062_01425 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
WBX89337
LinkDB
All DBs
Position
complement(311425..313254)
Genome browser
AA seq
609 aa
AA seq
DB search
MSDARALGVLQRVFGYESFRGDQQAIVDQVIGGGDALVLMPTGGGKSLCYQIPSLVREGT
GIVVSPLIALMQDQVDALTELGVRAAFLNSTQEWRVARDVEQAFLDGELDLLYVAPERLL
TDRCLQLLDRGRIALFAIDEAHCVSQWGHDFRPEYLGLSMLHERWPDVPRIALTATATAV
TRTEIAQRLSLDEARHFVSSFDRPNIRYRIVEKNEVRKQLLDMIRTEHEGESGVVYCLSR
ARVEETAEFLCNQGIDAMPYHAGLSAQVRAANQSRFLREDGVVMVATIAFGMGIDKPDVR
FVAHIDLPKSVEGYYQETGRAGRDGLPATAWLAYGLQDVVQQRRMIDESPGDESYRRRLG
QQLDAMLGLCETVECRRVRLLAYFGQQITACGNCDVCLDPPQAWDGTVAAQKVLSAVYRL
WKERGQRYGAGHIIDILRGKVTDRTQQHGHETLSVFGVGADLSDTAWRGVLRQLLAQGLL
TVDNEGFGTLALTEGSRAVLKGERQLMLRRESEKKPRSGKTGSGRPKAAAIDLPAELQPV
FEALRAWRGEVAKSHGVPAYVIFHDATLREIALAQPESMDDLSHINGVGARKLEAYGEEI
LQRVARPVL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgcgcgcgccctcggcgtgttgcagcgcgttttcggttacgaatccttccgc
ggcgaccagcaagccattgtcgatcaagtgatcggcggtggcgacgcgctcgtcctcatg
cccaccggcggcggcaagtcgctgtgttaccagattccctcgctggtgcgcgaaggcacg
ggcattgtcgtgtcgcccctgatcgcgctgatgcaggaccaggtcgacgccctgacggaa
ctgggcgtgcgcgcggcgttcctgaattcgacgcaggaatggcgggtggcccgcgacgtg
gagcaggcgttcctggatggcgagctcgacctgctgtatgtcgcgcccgaacgcctcctg
accgaccgctgcctgcagttgctcgaccgcggccgcatcgcgctgttcgccatcgacgaa
gcgcattgcgtgtcccaatggggtcacgatttccgccccgaatacctgggcctgtccatg
ctgcacgagcgctggccggacgtgccgcgcatcgcgctcacggccaccgccaccgccgtc
acccgtaccgagatcgcgcagcgcctgtcgctggacgaagcgcgccatttcgtctcgagc
ttcgaccgccccaacatccgctaccgcatcgtcgagaaaaacgaggtgcgcaagcagctg
ctggacatgatccgcaccgagcacgaaggcgagtccggcgtggtgtactgcctgtcgcgc
gcccgggtggaagagaccgccgaattcctgtgcaaccagggcatcgatgcgatgccgtac
cacgcgggcctgagcgcccaggtgcgggcggccaaccagtcgcgcttcctgcgcgaggac
ggcgtggtgatggtcgccaccattgcgttcggcatgggcatcgacaagccggacgtgcgc
ttcgtggcgcacatcgacctgcccaagtcggtcgaaggctactaccaggaaaccggccgc
gccggccgcgacggcctgcccgccaccgcatggctggcctacggcttgcaggacgtggtg
cagcagcgccgcatgatcgacgaatcgcctggcgacgagtcctatcgccggcgcctgggc
cagcagctcgacgccatgctgggcctgtgcgaaaccgtggaatgccggcgcgtgcgcctg
ctggcgtactttggccagcagatcaccgcgtgcggcaactgcgacgtctgcctggacccg
ccgcaggcgtgggacggcaccgtcgcggcgcagaaggtgctgtcggcggtgtaccggctc
tggaaggaacgcggccagcgctacggcgctggccacatcatcgacatcctgcgcggcaag
gtcactgaccgcacccagcagcatggccacgagacgctcagcgtattcggcgtgggcgcc
gacctgtccgacaccgcctggcgcggcgtgttgcgccagctattggcgcagggcctcttg
acggtggacaacgaaggcttcggcacgctggccctgaccgaaggcagccgcgccgtgctc
aagggcgaacgccagctcatgctgcggcgcgagtccgaaaagaaaccgcggtccggcaag
acgggcagcggacggcccaaggcggcggcgatcgacctgccggccgaattgcagcccgtg
ttcgaagccctgcgcgcctggcgcggcgaagtcgccaagagccacggcgtgcccgcctac
gtgatctttcacgacgccacgcttcgcgagatcgcgctggcgcagcccgagtccatggac
gacctgagccacatcaacggcgtgggggcccgcaagctggaagcctacggcgaagaaatc
ctgcagcgggtggcgcggccggtgctgtag
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