Achromobacter mucicolens: PE062_05055
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Entry
PE062_05055 CDS
T08808
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
amui
Achromobacter mucicolens
Pathway
amui03030
DNA replication
amui03430
Mismatch repair
amui03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PE062_05055 (dnaE)
03430 Mismatch repair
PE062_05055 (dnaE)
03440 Homologous recombination
PE062_05055 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amui03032
]
PE062_05055 (dnaE)
03400 DNA repair and recombination proteins [BR:
amui03400
]
PE062_05055 (dnaE)
Enzymes [BR:
amui01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PE062_05055 (dnaE)
DNA replication proteins [BR:
amui03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PE062_05055 (dnaE)
DNA repair and recombination proteins [BR:
amui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PE062_05055 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
RecG_wedge
DUF7861
Motif
Other DBs
NCBI-ProteinID:
WBX90010
LinkDB
All DBs
Position
1090549..1094040
Genome browser
AA seq
1163 aa
AA seq
DB search
MSEAVTTPTPFVHLRVHSEFSVVDGTVRIPDLIKRVAKLGQPAVALTDLSNLFGLIKFYK
GARGAGVKPIAGCDVWISNDEDPAKPFRLLLLVRNHQGYLNLCELLSKAFLTNQGKGRAE
IRREWLQGQAGLIALSGGRAGDVGQALEAGNAVSALALARQWALMFPGSYYIELQRAGMD
GDEGYCQAAMRLAAEAGLPVVATHPVQFLDEFEFQAHEARVCIAEGEILANPRRVRRFSK
EQYLLSSEEMARRFADVPSALANTVEIAKRCNLSLVLGKPRLPNFPTPDGVTLDDYLVQL
SEQGLEKRMEFLFPDPAERESKREQYYERLRWECKTIIQMGFPGYFLIVQDFINWGKNNG
VPVGPGRGSGAGSLVAYALGITDLDPIRYDLLFERFLNPERVSMPDFDIDFCQDNRERVI
DYVKEKYGRAAVSQIATFGTLGAKAVVRDAGRVLDMPYMFCDGLSKLIPFNPMDPWTLER
TLKDEPAFKDRYEQEEEVRSLVDLAKPLEGLTRNIGMHAGGVLIAPGKLTDFCPLYCQPG
QENSAVSQFDKDDVEAAGLVKFDFLGLRNLTILDWAVRYVRQFNAEKRDFDVMALALDDP
AAYKILCDANTTAVFQLESRGMKELLKKLRPNTFEDIIAMLALYRPGPLESGMVDDFVNR
KHGRAAVDYFHPDLEATLKSTYGVIVYQEQVMLISQIIGGYSLGGADLLRRAMGKKKPEE
MAKHRELFEQGAKEKGHDPDLAVKLFDLMEKFAGYGFNKSHSAAYALISYQTAWLKAYHP
TEFLAATMSSDMDDTDKVQIFCRDAQDNGVEVLPPDVNHSGYRFEPVADKHTEKGKPPRT
MRYGLGAVKGTGQGAVEDILRARKEGGPFLNLFDFCRRVSKQAVNRRTIEALIKAGAFDT
IEPNRAAMLASVPTAMEAAEQAARSANQASLFGDDSGDVVAGELAKVAPWDLHKKLTEEK
SALGYYYSGHLFDAWRDEVRRIVPMQLARVEPQRDLQWMCGVLASVRVMMTRRGKMVFAV
LDDGTAQVEISVFNELYEKHRNRLREDQLVIVQGKVSNDDYSGGMRIVAEQLYDLQLARE
ARAKSLRVKLNGTADAARLRQMLNPFRAEPENGIPGVPVDIVYTKNNFLCTVRLGEEWRV
RMADTLLANLNDWTKPDGVEVTY
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagccgtaacgaccccgaccccatttgttcacctgcgcgtccactccgaattt
tcggtcgtggacggcacggtgcgtattcccgacctcatcaagcgtgtggccaagctgggc
cagcccgccgttgccctgaccgatctgtcgaacctgttcggactgatcaagttctacaag
ggcgcgcgcggcgcgggggtcaagcccatcgccggctgcgacgtctggatctccaacgac
gaagaccccgccaagccatttcgcctgctgttgctggtgcgcaaccaccagggctatctg
aatctctgcgaactgctgtccaaggccttcctgacgaaccagggcaagggccgcgcggaa
atccgccgcgaatggctgcaagggcaggcgggcctcatcgccttgtccggcggacgggcc
ggcgacgtcgggcaggcgctggaggccggcaatgccgtctcggcgctggccttggcccgc
cagtgggcgctgatgttccccggcagctactacatcgaattgcagcgcgccggcatggac
ggcgacgaaggctactgccaggccgccatgcggctggccgccgaagccggcctgccggtg
gtcgccacccatcccgtgcagttcctggatgaattcgaattccaggcccatgaggcccgt
gtctgcatcgccgaaggcgagatcctggccaacccgcgccgcgtgcggcggttctccaaa
gagcagtacctgctcagctccgaggaaatggcgcgccggttcgccgacgtgccatcggcg
ctggccaatacggtcgaaatcgccaagcgctgcaacctgagcctggtgctgggcaagccg
cgcctgcccaatttccctactccggatggcgtgacgctcgacgattacctggtccagctc
tccgagcagggcctggaaaagcgcatggagttcctgtttccggaccccgccgagcgcgag
tccaagcgcgagcagtattacgagcggctgcgctgggagtgcaagaccatcatccagatg
ggctttcccggctacttcctgatcgtgcaggacttcatcaactggggtaagaacaacggc
gtgccggttggaccgggccggggttcgggcgccggttcgctggtggcctacgcgctgggc
atcaccgacctcgatcccatccgctatgacctgctgttcgagcgcttcctgaatcccgag
cgggtctccatgcccgacttcgatatcgacttctgccaggacaaccgcgaacgggtcatc
gactacgtcaaggaaaaatacggccgggccgcggtcagccagatcgcgaccttcggcacg
ctgggcgccaaggccgtggtgcgcgacgcgggccgcgtgctggacatgccctacatgttc
tgcgacggcctgtccaagctgatcccgttcaacccgatggatccctggacgctggagcgc
acgctcaaggacgagcccgccttcaaggaccgctacgagcaggaagaagaagtccgctcg
ctggtcgacctggccaagccgctcgaaggcctgacccgcaacatcggcatgcacgcgggc
ggggtgctgattgcgcccggcaagctcaccgacttctgcccgctgtactgccagccaggg
caggagaacagcgcggtctcgcaattcgacaaggacgacgtcgaggccgccggcctggtg
aagttcgacttcctggggctgcgcaacctgacgattctggactgggccgtgcgctacgtg
cgccagttcaacgccgaaaagcgcgacttcgacgtcatggcgctggccctggacgatccg
gcggcctacaagatcctgtgcgatgccaacaccaccgcggtgttccagcttgaatcgcgc
ggcatgaaagagctgctcaagaagctgcggcccaacacgttcgaagacatcatcgccatg
ctggccctgtatcgtccggggccgctggaatcgggcatggtggacgacttcgtgaaccgc
aagcacgggcgcgcggccgtcgattatttccacccggatctggaagccaccctgaagagc
acctacggggtcatcgtctaccaggaacaggtgatgctgatctcgcagatcatcgggggc
tactcgctgggcggcgccgacctgctgcgccgggccatgggcaagaaaaagcccgaggaa
atggccaagcaccgcgaactgttcgaacagggcgccaaggaaaagggccacgatcccgac
ctggcggtcaagcttttcgacctgatggagaagttcgccggctacggcttcaacaagtcg
cactcggccgcatacgcgctgatctcctaccagaccgcctggctgaaggcctaccacccg
accgagttcctggccgccaccatgtcctccgacatggacgacaccgacaaggtccagatc
ttctgccgcgacgcccaggacaacggcgtcgaggtgctgccgcccgacgtcaaccactcg
ggctaccggttcgagcccgtcgccgacaagcacaccgaaaaaggcaagccgccgcgcacg
atgcgttacgggctgggcgccgtcaagggcacggggcagggcgcggtcgaagacatcctg
cgcgcgcgcaaggaaggcggcccgttcctgaacctgttcgacttctgccgccgcgtcagc
aagcaggccgtcaaccgccgcaccatcgaagcgctgatcaaggccggcgcgttcgacacc
atcgagcccaaccgcgccgccatgctggcttcggtgcccaccgccatggaagcggccgag
caggccgcgcgcagcgccaaccaggcctcgctctttggcgacgacagcggcgacgtggtc
gccggcgaactggccaaggttgcgccctgggacctgcacaagaagctgaccgaagaaaaa
tccgcgctgggctattactacagcggccacctgttcgatgcgtggcgcgacgaagtgcgc
cgcatcgtgccgatgcagcttgcgcgtgtggaaccccagcgcgacctgcaatggatgtgc
ggcgtgctggccagcgtgcgcgtcatgatgacccgccgcggcaagatggtctttgccgtg
ctggacgacggcacggcgcaggtcgagatctcggtcttcaacgaactttacgagaagcac
cgcaaccggctgcgcgaagaccagctagtcatcgtgcagggcaaggtcagcaacgacgac
tattccggcggcatgcgcatcgtcgccgaacagctctacgacctgcaactggcgcgcgag
gcgcgcgccaagtccctgcgcgtcaagctcaacggcactgccgatgcggcccgcctgcgt
cagatgctcaatcccttccgcgcggaacccgagaatggcattccgggcgtgccggtcgat
atcgtctacacgaagaacaatttcctgtgcacggtcaggctcggggaggaatggcgcgtg
cgcatggccgacacgctgctggccaacctgaacgattggaccaagccagatggcgtggag
gtcacctactaa
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integrated database retrieval system
