Achromobacter mucicolens: PE062_20405
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Entry
PE062_20405 CDS
T08808
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
amui
Achromobacter mucicolens
Pathway
amui02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
amui00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PE062_20405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amui03021
]
PE062_20405
Transcription machinery [BR:
amui03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PE062_20405
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_17
HTH_23
PhyR_sigma-like
Phage_terminase
MerR
AAA_lid_6
Motif
Other DBs
NCBI-ProteinID:
WBX87767
LinkDB
All DBs
Position
complement(4445000..4445560)
Genome browser
AA seq
186 aa
AA seq
DB search
MSGSEGASQDFESLYGNHHGWLLAWVNWRLGNAADAADLAHDAFVRLLTRPCKFDNARHA
RTYLRRMANGMCIDLWRRRDLEQAWLDALAAQPEPTVSSAEDQAMVLQALGEIDAMLRGL
PPKTAHAFVMAVACEMTDQEVADVLGVSSRMVRKYVAQAMLSCMKLEARLAAGMAGEPSM
PQVAAP
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggatcggaaggggcatcccaggacttcgaaagcctgtacggcaatcaccacggc
tggctgctggcctgggtgaactggcgcctgggcaatgcggcggatgccgccgacctggcg
cacgacgcgttcgtgcgccttttgacgcgcccgtgcaagttcgacaacgcccggcatgcc
aggacctatctgcgccggatggccaacggcatgtgcatcgacctgtggcgccgtcgcgac
ctggagcaggcctggctggacgccctggcggcgcagccggaacccacggtgtcgtcggcc
gaagaccaggccatggtgctgcaggcgctgggcgagatcgacgccatgttgcgcggactg
ccgcccaagaccgcgcacgccttcgtgatggcggtggcgtgcgaaatgaccgaccaggaa
gtggccgacgtgctgggcgtgtcatcgcgcatggtccgcaagtatgtcgcgcaggccatg
ctgagctgcatgaaactggaagcgcggctggcggcggggatggcgggcgagccgtcgatg
ccgcaggtggcggccccatga
DBGET
integrated database retrieval system
