Achromobacter mucicolens: PE062_25065
Help
Entry
PE062_25065 CDS
T08808
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
amui
Achromobacter mucicolens
Pathway
amui02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
amui00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PE062_25065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amui03021
]
PE062_25065
Transcription machinery [BR:
amui03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PE062_25065
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
NirdL-like_HTH
HTH_28
T7SS_ESX1_EccB
HTH_11
TPR_4
Motif
Other DBs
NCBI-ProteinID:
WBX88640
LinkDB
All DBs
Position
complement(5432434..5432979)
Genome browser
AA seq
181 aa
AA seq
DB search
MPLSPPVIVSDSLTSPSVEALYCDHHHWLRSWLLHRLGNTADAADLAHDTFLRLLGKTVF
PHFGSVGEARAYLRTVGHALCVDLWRRREVERAWLDALAAQPELVAPSLEHQAIIIETLL
AVGRMLGRLSEKAAAAFVMAQVDGTPYRDIAATLGVSERMIKKYIAQAMLQCALIEAGLN
A
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
ttgccgctgtcccctcccgtgatcgtctccgactccctgacttctcccagcgtggaggcc
ctctattgcgatcaccaccactggctgcgcagttggttgctgcatcggctgggcaacacc
gccgatgccgccgacctggcgcacgacacgttcctgcgcttgctgggcaagacggtgttt
ccgcacttcggcagcgtgggggaagcgcgcgcctacctgcgcacggtgggccatgcgctg
tgcgtggacctgtggcgccggcgcgaagtcgaacgcgcctggctcgacgcgctagccgcg
cagcctgagctggtcgcgccctcgctggaacaccaagccatcatcatcgaaacgctgctc
gccgtgggccgcatgctgggtcgcctgtcggagaaagccgccgccgcgttcgtcatggcg
caggtcgacggcacgccctatcgcgacatcgcggccacgctcggcgtgtccgagcgcatg
atcaagaagtacatcgcccaggccatgctgcagtgcgccctgatcgaagccgggttgaac
gcctga
DBGET
integrated database retrieval system
