Achromobacter mucicolens: PE062_25425
Help
Entry
PE062_25425 CDS
T08808
Name
(GenBank) TM0106 family RecB-like putative nuclease
Organism
amui
Achromobacter mucicolens
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_H_2
AAA_12
AAA_11
AAA_30
UvrD_C_2
AAA_19
Viral_helicase1
NAT10_TcmA_helicase
PDDEXK_1
MeaB
IstB_IS21
NPHP3_N
nSTAND3
ResIII
SLFN-g3_helicase
AAA_16
PIF1
Motif
Other DBs
NCBI-ProteinID:
WBX88710
LinkDB
All DBs
Position
5518311..5521697
Genome browser
AA seq
1128 aa
AA seq
DB search
MFSASDLVAFLECEHLTTLDLINLDDPLPQAEEDEQLELIQQKGLDHERAYLERLRASGR
RIVDVSDAGDGLAARLARTREAMADGADVIYQAAFRHGRYIGHADFLQKTARPSQLGAYS
YEASDTKLARSARAKFAIQLSFYSWLLGLEQGAAPLYMHVVLGSGREVSLRVADYAHYFR
QVMRRFEAHVDKRDDAATYPDPCEKCAQCRWDPLCKARRAQDDHLSLVANITRQQIRKLN
AQGIRTLAQLGTLAPDATVARMEPAILHKLRAQAALQLRARTDGGRHWDRIAKDPDDAAP
RGFERMPQPDPGDMFFDMEGDPLEEGGLEYLFGLYVIDDGQERFVPFWAHNRSEEKQAFE
AFIDFVVARLHRHPEAHIYHYAPYEATAIKRLMSVHATREAEVDNLLRMNKLVDLYQVVR
EGVRVSEPGYSIKNIEYFYLPQREGGVTNAGASIVYYERWKRTGEAQLLQDIADYNRDDV
LSTYKLRDWLCALRPDGMPWANRRDAQEAIDAARFQVGEKTQAELRLEPYRAALLGPLPA
DEADWSGRDSYRALVYQLLDFHRREQKPEWWAMFARMQATEAELVQDNECLGGLVRDDSV
APEPVAQSLRYTYRFPAQQTKLRTGSACTDVRGGPAISRLTVDMGASVATFTLSRKATPP
QRLSLGPGRPVSIDELANAMFRYGDALLASADGASTPFRAVDALLRHEPPRIAGGAPGTP
LADPGANLLDQVVDIVGRMDETTLFLQGPPGAGKTYTGSRVLVHLLRQGKRIAVTSNSHH
AINNLLAGLEKAAREAGLAFTGAKKSGKEGDDSCFNGEFIEDVFANDKIDLSRHQLVAGT
AWLFSRADFQQQFDYLFVDEAGQVSLANLVALGQCARNIVLLGDQMQLGQPTKGTHPGRS
GESTLEYLLNGHATIAADHGIFLDTSYRMHPAICGFISDAIYDGRLRAAESAAGQGLVLG
ADAADALAASGIRYVPVVHEGNAQSSDEEAREVAALYGSLMRQRYLDKTGRAVPITPDDV
LVVAPYNVQVNTLRQALPEGARVGTVDKFQGQEAQVVIISMATSSGETMPRDMEFLFSRN
RLNVAVSRAKSLAILVASPALLSVRCQTPEQMALVNTLCWVAEAGRPA
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
ttgttttccgcttccgatctggtggcgttcctggaatgcgagcacctcaccacgctggat
ctgatcaatctggacgacccgttgccgcaagcagaagaggacgaacagctcgaactgatc
cagcaaaaagggttggaccacgaacgcgcgtatctggaacgcctgcgcgccagcggacgg
cggatcgtcgatgtgagcgatgcgggcgacggactggccgcgcgtctggcccgcacgcgc
gaggcgatggccgacggcgccgacgtcatctaccaggcggcgtttcgtcacggccggtat
atcggccatgccgacttcctgcagaagaccgcgcgcccgtcgcagctgggcgcctacagc
tacgaggccagcgacaccaagctggcgcgttcggcgcgcgccaagttcgccatccagctc
tcgttctattcatggctgctgggcttggagcagggcgcggcgccgctgtacatgcatgtg
gtgctgggcagcggccgcgaggtatccctgcgcgtggccgactacgcgcattattttcgc
caggtcatgcgccgcttcgaggcgcacgtggacaagcgcgacgatgccgccacctatccc
gacccttgcgagaaatgcgcccagtgccgctgggacccgctgtgcaaggcgcgccgcgcg
caagacgatcatctgtcgctggtcgccaacatcacgcggcagcagatccgcaagctgaac
gcccagggcatccgcacgctggcgcagctgggcacgctggcgccggacgccaccgtggcg
cgcatggagcccgccatcctgcataagctgcgggcgcaggcggcgctgcagttgcgcgcc
cggaccgacggggggcgtcactgggaccgcatcgccaaggacccggacgacgccgcgccg
cgcggtttcgaacgcatgccgcagccggacccgggggacatgttcttcgacatggaaggc
gatccgcttgaggaaggcgggctggaatatctgtttgggctgtacgtcatcgacgacggg
caggagcgcttcgttccgttctgggcgcacaaccgcagcgaagaaaagcaggcgttcgaa
gccttcatcgacttcgtggtggcgcgcctgcaccgccatcccgaggcgcacatctaccac
tacgcgccctacgaggcgacggcaatcaagcggctgatgtcggttcacgccacccgcgag
gccgaagtcgacaacctgctgcgcatgaacaagctggtggacctgtaccaggtcgtgcgc
gaaggcgtgcgcgtgtccgagccgggctattcgatcaagaacatcgagtatttctacctg
ccgcagcgcgagggcggcgtgaccaacgccggcgccagcatcgtctattacgaacgctgg
aagcgcacgggcgaggcgcaattgctgcaggacattgcggactacaaccgcgacgatgtg
ctgtccacgtacaagctgcgcgactggctgtgcgcgctgcgtcctgacggcatgccctgg
gcgaaccgccgcgatgcgcaggaagcgatcgatgccgcccggttccaggtcggcgaaaag
actcaggccgaactgcggctggagccgtatcgcgccgcgctgctcgggcccttgccggcc
gacgaagcggactggtccggccgcgacagctaccgcgcgctggtctaccagttgctggat
tttcaccgccgcgagcagaagcccgagtggtgggcgatgttcgcccgcatgcaggcgacc
gaggccgaactggtgcaagacaacgaatgcctgggcgggctggtgcgcgacgacagcgtg
gcccccgagcccgtggcgcaatcgctgcgctacacctaccgcttcccggcgcagcagacc
aagctgcgcaccggatcggcctgcacggacgtgcgcggcggaccggccatcagccggctg
acggtcgacatgggggccagcgtggccaccttcaccctgtcgcgcaaggccacgccgccg
cagcgcctgtcgctcgggccgggcaggccggtcagcatcgacgaactggccaacgccatg
ttccgctacggcgatgcgctgctggcgtcggccgatggcgccagcacgccgttccgggcg
gtggacgcgctgctgcggcatgaaccgccgcgcatcgccggcggggcgcccggcaccccg
ctggccgatccgggcgcgaacctgcttgaccaggtcgtggacatcgtcggccgcatggac
gagaccacgctgttcctgcaggggccgccgggggcgggcaagacctataccgggtcgcgc
gtgctggtgcacctgctgcgccagggcaagcgcatcgccgtcacgtccaacagccaccat
gccatcaacaacctgctcgccggcctggaaaaggccgcgcgcgaggcgggcttggcgttc
acgggcgccaagaaatcgggcaaggaaggcgacgattcctgtttcaacggcgaattcatc
gaagacgtctttgccaacgacaagatcgacctgtcgcgccatcagctggtggcaggcacg
gcgtggctctttagccgggccgattttcagcagcagttcgattacctgttcgtggacgag
gcgggccaggtcagcttggcgaacctggtggcgctgggccaatgcgcgcgcaacatcgtg
ctgctgggcgaccagatgcagctgggccagccgaccaagggcacgcatcccggccgctcc
ggcgaatccacgctggaatatctgctgaacggccatgccaccatcgcggccgatcacggc
atcttcctggacacctcgtaccgcatgcacccggcgatctgcggtttcatttcggacgcc
atctacgacggccggctgcgcgccgcggaatcggcggccgggcagggcctggtgctgggc
gcggacgccgcggacgcactggccgccagcggcatccggtacgtgccggtcgtgcacgag
ggcaatgcgcagtccagtgacgaagaagcgcgcgaagtcgccgcgctgtatggcagcctg
atgcgccagcgttatctggacaagacgggccgcgcggtgcccatcacgcccgacgacgtg
ctggtggtcgcgccctacaacgtgcaggtcaatacgttgcggcaggcgctgcccgagggc
gcgcgggtgggcacggtcgacaagttccagggccaggaggcgcaggtggtgatcatttcc
atggccacctccagcggcgagacgatgcctcgcgacatggaattcctgttcagcaggaac
cgcctgaatgtggcggtgtcgcgggccaagtcgctggcgatcctggtcgctagtcccgcc
ctgctgtcggtgcgctgccagacacccgagcagatggcgctggtcaatacgctgtgctgg
gtagccgaggccggtcggccggcgtaa
DBGET
integrated database retrieval system
