Achromobacter mucicolens: PE062_26670
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Entry
PE062_26670 CDS
T08808
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
amui
Achromobacter mucicolens
Brite
KEGG Orthology (KO) [BR:
amui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amui03016
]
PE062_26670
Enzymes [BR:
amui01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
PE062_26670
Transfer RNA biogenesis [BR:
amui03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PE062_26670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
DUF7691
RNase_P-MRP_p29
Motif
Other DBs
NCBI-ProteinID:
WBX88943
LinkDB
All DBs
Position
complement(5805552..5807447)
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AA seq
631 aa
AA seq
DB search
MYVFYEDDGSFKAGHILSETDASLQVESESGKRSKIKRANTLFNFASPDPATLMSQAAAT
AETLDLQFLWECAPQEEFDSPALAADYFGHAPTPVEQAALLMRLHGAPAYFHRRGKGRYR
PAPPDILAAALAALEKKQRQAEQQQEWVDEMAAGRLPEPIAQAAESLLIRPDKNSQQWKA
LDAACARLGKTPDRLLLELGAWPHALALHKRRFLAVNFPRGLAFPDVELPPIDRELPLAD
AEIYSVDDVTTTEIDDALSVSTLPDGRVRVGIHVAAPGLSVTRDSELDKLARARLSTVYM
PGDKIPMQPDSVIQAFSLDAGREVPALSLYVIANSETGEVIESETRLERIVVRENLRHNM
LDTQVTEASLADPAADLPYGHWLRPLWKLAQALSAQRENVRGKPENNSRVEYSFYLDGNP
DDPDTPVRLVPRQRNAPLDRMVAEYMILANNLWGGLLNQHGVPGIYRSQQAGRVRMSTQA
LPHEAIGVPQYAWSTSPLRRYVDLVNQWQLIAAVDHGVSARLIAPFKPRDADLFAIIGAF
DAQYAAWAEFQSAMERYWCLRWLKQNGVTRTVAHVLREDLVRFANAPLVTRVGGMPEFER
GTAVEVDILGMDELSLELDCRFVGEVKGESA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgttttacgaagacgacggcagcttcaaggccggccatatcctgtccgagacc
gacgccagcctgcaggtggagtcggaatcgggcaagcgcagcaaaatcaagcgcgccaac
accctgttcaacttcgcctcgccggacccggcgaccctgatgagccaggcggccgctacg
gctgagacgctggacctgcaattcctgtgggaatgcgcgcctcaggaagaattcgactcg
cccgccctggccgccgattacttcggccacgcccccacgcccgtcgaacaggccgcgctg
ctgatgcgcctgcacggcgcgccggcttacttccatcgccgcggcaagggccgctaccgc
cctgccccgcccgacatcctggccgccgcgctggccgcgctcgaaaagaagcagcgtcag
gccgagcagcaacaggaatgggtcgacgaaatggccgccggccgtctgcccgagccgatc
gcgcaggcggccgaatcgctgctgatccgcccggacaagaactcgcagcaatggaaggcg
ctggacgcggcatgcgccaggctgggcaagaccccggaccgcctgctgctcgaactgggc
gcctggccgcacgcgctcgcgctgcacaagcgccgcttcctggccgtcaacttcccgcgc
ggactggccttccccgacgtggaactgccccccatcgaccgcgaactgccgctggccgat
gccgagatctactccgtggacgacgtcaccaccacggaaatcgacgatgcgctgtcggtc
tcgaccctgccggacggccgcgtgcgcgtcggcatccacgtcgccgcgccgggcctgtcc
gtcacccgcgacagcgaactggacaagctggcccgcgcccgcctgtccaccgtctacatg
cccggcgacaagatcccgatgcagccggacagcgtcatccaggcgttctccctggacgcc
ggccgcgaagtgcccgcgttgtcgctgtacgtcatcgccaattccgaaaccggcgaagtc
atcgaatcggaaacccgcctggaacgcatcgtcgtgcgcgaaaacctgcgccacaacatg
ctggacacccaggtcaccgaggcaagcctcgcggaccccgcagccgatctgccctatggc
cactggctgcgcccgctctggaagctggcccaggccttgtcggcgcaacgcgaaaatgtg
cgcggcaagccggaaaacaactcccgggtcgaatacagcttctatctggacggcaacccc
gacgatcccgacacgcccgtgcgtctggtcccgcgccagcgcaacgcgccgctggaccgc
atggtggccgagtacatgatcctggccaacaacctgtggggcggcctgctgaaccagcac
ggcgtgcccggcatctaccgctcgcaacaagcgggccgcgtgcgcatgagcacgcaggcg
ctgccgcacgaagccatcggcgtcccgcaatacgcgtggagtacgtcgccgctgcgccgc
tatgtcgacctggtcaaccagtggcagctgatcgccgcggtggaccacggcgtgtccgcc
cgcctgatcgcccccttcaagccgcgcgacgcggacctgttcgccatcatcggcgccttc
gacgcgcaatacgccgcctgggccgagttccagagcgcgatggagcgctactggtgcctg
cgctggctgaaacagaacggcgtgacgcggacggtggcgcatgtgctgcgcgaggatctc
gtgcggtttgcgaatgcgccgctggtgactcgggtcggtgggatgcctgagtttgagcgg
gggacggctgttgaagtggatattctgggcatggatgagttgtctctggagttggattgt
cggtttgtgggcgaagttaagggggaatctgcttag
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