Allobaculum mucilyticum: KWG62_02145
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Entry
KWG62_02145 CDS
T08025
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
amuo
Allobaculum mucilyticum
Brite
KEGG Orthology (KO) [BR:
amuo00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KWG62_02145 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amuo03021
]
KWG62_02145 (rpoD)
Transcription machinery [BR:
amuo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KWG62_02145 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
HTH_25
DUF722
DAHL
Motif
Other DBs
NCBI-ProteinID:
UNT96584
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Position
complement(505596..506795)
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AA seq
399 aa
AA seq
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MAGKTKKKGLTFNSIDDVKLILQASKESGAKLNQKEFMDALNDLDLDDSQINDLILWCQK
NRIGIMNEDADLDDDTEEAEELDEELDDEDDDTSDDAEGDAEGREEELARLEKTFAEATN
AKTSDPVKAYLKEIGAIPLLTPAQEVEIAKRIEAGDEEAKQILIDSNLRLVVSIAKKYVG
RGLLFLDLIQEGNIGLIKAVEKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHM
VETINKMTRIQRLLVQDLGRDPIPEEIAEKMEDMTAERVSEIQRSALDPVSMETPVGDEN
DTFLGDFIEDKSTMTPEEYTHNQLLKETIEEVLSTLTEREEKVIRLRFGLDNGRTWTLEE
IGKKFNVTRERIRQIEAKAIKKLKGPQRAKLLAVFHQGG
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggccggaaaaacgaagaaaaaaggtctgactttcaattcgatcgacgacgtcaaactc
attctgcaagcttcgaaggaatctggtgcgaagctgaatcagaaagagttcatggatgct
ctgaacgacctggatcttgatgattctcagattaacgacctcatcctctggtgccagaag
aaccgaatcggcatcatgaatgaagacgcggatctggatgatgatacagaagaagccgag
gaactcgatgaagagctcgatgatgaagatgacgatacgtctgacgatgcggaaggcgat
gccgaaggacgggaagaggaacttgcccgtctggaaaaaacgttcgctgaagcaaccaat
gccaaaacgagcgatccagtcaaagcgtacctgaaagagattggtgcgattccgctgctg
acaccggctcaggaagttgaaattgccaagcgtattgaagcaggcgatgaagaagccaaa
cagattctgattgactccaacctgcgtctagttgtttctattgcgaaaaaatatgtcggc
cgcggcctgcttttccttgacctgattcaggaaggaaacatcggactgatcaaagccgtc
gaaaaatttgactacaccaaaggattcaaattctctacttatgcaacatggtggatccgt
caggcgattacccgtgcaatcgctgaccaggcccgtacgatccgtatcccggttcatatg
gtcgaaaccatcaataagatgacccgtattcagcgtctgctcgtccaggaccttggacgt
gacccgatcccggaagaaattgccgagaagatggaagacatgacggctgagcgtgtcagc
gagattcagcgttccgcactggatccggtttccatggaaacacctgtcggtgatgagaac
gataccttccttggcgacttcattgaagacaagtcgacgatgactccggaagagtatacc
cataaccagctgctcaaagagaccatcgaagaagttctttccacgctgactgagcgtgaa
gagaaagttatccgtctgcgttttggtctggataacggcagaacctggacacttgaagag
atcggcaaaaaattcaatgtaacgcgagagagaatccgtcagatcgaagcaaaagcaatc
aaaaagctcaaaggaccgcagcgtgctaaactgctcgccgtcttccatcagggcggataa
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