Allobaculum mucilyticum: KWG62_08650
Help
Entry
KWG62_08650 CDS
T08025
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
amuo
Allobaculum mucilyticum
Pathway
amuo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
amuo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KWG62_08650 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amuo03021
]
KWG62_08650 (rpoC)
03400 DNA repair and recombination proteins [BR:
amuo03400
]
KWG62_08650 (rpoC)
Enzymes [BR:
amuo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KWG62_08650 (rpoC)
Transcription machinery [BR:
amuo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KWG62_08650 (rpoC)
DNA repair and recombination proteins [BR:
amuo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KWG62_08650 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
BRE
Apocytochr_F_C
tRNA_NucTransf2
DUF6384
MCM_C
Motif
Other DBs
NCBI-ProteinID:
UNT95408
LinkDB
All DBs
Position
2082798..2086712
Genome browser
AA seq
1304 aa
AA seq
DB search
MSVNNFSSIQVKLASPETIEKWSHGEVTKPETINYRSQKAERDGLFCERIFGPTKDYECA
CGKYKKVRHYNGIVCERCGVEVTKSSVRRERMGHIHLAAPVAHIWYLRGIPSRMALLLDL
TPKQLEEVVYFVSYIVTDPMDSELSYKQILSEKEYREKQAQYGPLGFKAKTGAEAVLELL
QNVDLEEEYAKVTSQLEDASGEKRKKLIKRLDTINAFRHSDNKPEWMILQNIPVIPPDLR
PMLQLDGGRFATSDLNDLYRRVITRNNRLKKLLDLGTPNIIVQNEKRMLQEAVDALIDNG
RRSKAITGAGGRALKSLSHSLKGKQGRFRQNLLGKRVDFSGRSVIAVGPDLKMYQCGIPR
EMAINLFKPFVINEMVNSQLVTNAKQAEKMIEARDERIWPVVEQVIDGYPVLLNRAPTLH
RLGIQAFLPKLVEGRAMRLHPLVCTAFNADFDGDQMAIHVPLGEEARAEALVMMLGSHNI
LGPKDGKPIVTPGQDMVMGNFYLTMEETKQELLDEAERYRKAGVEKEAAAWERYANAEGT
VYADVDEVMLAYKSGQVHLHSRIAIPVSGLNKTSFDESHKDDYLATTVGKIIFNGMFPAD
FPYLNEVSTENFKQTPEKYFIKPGTDIKAFINDLPLADAVKKKDLGKVIAEVFKRYKVDD
VADILDQIKSLGFRYSTVAGITVALSDIEVAPNKEEHVDEGREKADELKHFQQKGFLTMQ
EWERHLNKLWDGVKNDIVGELMSNLPRKNPINMMATSGARGNTSNFTQLAGMRGLMARPA
KGKSRAGEYVPSIIEVPIYSCFREGLNVSEFFISTHGVRKGLTDTALKTAESGYLTRRLV
DVAQDVIIKEDDCGTDKGFWVEDLVDRKNNTVIESLYDRLVGRYSKQDVHHPVTGELIVA
SDTYMTEDIARKIVDAGVTGMYIRSPFTCKSTNGICRKCYGKNMATGKDVEVGEAVGTMA
AQSIGEPGTQLTMRTFHTGGVAGGDGGDITQGLPRVEELFEARHPKGVAVIAQISGEITS
IKRIDGTLRQEVIIKNETEEVSHKINANQTLRPWVAEGEHIKAGQPLTEGPLDPKELLQV
AGVNEVQNYILKEVKKVYQSQGIEISDKHLEVMIRQMLKKVIVVDPGDTDLNTGVQLSLN
NITQINRDALLQGKTPATFKPILLGISKSSVETDSFLSAASFQETTKVLTDATIKGKVDH
LIGLKENVIIGKLIPAGTGCKGDRPQNEEVRAMAEKLRQKRLARQVTQHHDSTFEQFAST
AMSAPEKPDLLLPEAPEDRSILENDSILNDPESFAEALEHMELK
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtaaataacttttcttcgattcaggtaaagctcgcttcgccggagaccattgaa
aaatggtcccacggcgaagtcaccaaacctgaaacgatcaactaccgctcgcagaaagca
gaacgcgacggcctgttctgcgaacgcattttcggtccgacaaaagactacgagtgcgcc
tgcggcaaatataaaaaagtccgtcattacaacggcatcgtctgcgaacgctgcggtgtc
gaagtaaccaaatcgagcgtccgccgcgagagaatgggtcacattcatctcgcagcgcct
gtcgctcacatctggtatctgcgcggaattccttcccgcatggcccttcttcttgacctg
acaccaaagcagcttgaagaagttgtctacttcgtttcctatatcgttaccgacccgatg
gattccgaactgtcctacaagcagattctttctgagaaggaataccgcgaaaaacaggct
cagtacggaccgctcggcttcaaggcgaaaaccggtgctgaagctgttctcgaactgctc
cagaacgtagacctggaagaagagtacgcaaaggtcacttcccagcttgaagatgcttcc
ggcgaaaaacgcaaaaagctcatcaagcgtcttgatacgatcaatgcgttccgtcattcg
gacaacaagccggaatggatgattctccagaatattccggtaatcccgcctgatctgcgt
cctatgctgcagctcgacggcggacgtttcgcaacgagtgatctgaacgacctttaccgt
cgtgtcatcacccgaaacaaccgtctgaaaaaactgctcgacctcggtacgccgaacatc
atcgtgcagaacgaaaagcgcatgcttcaggaggctgtcgatgcgctgatcgataacgga
cgccgttccaaagccatcactggcgccggcggacgtgcactgaaatccctgtctcattcc
ctgaaaggtaaacagggccgtttccgtcagaacctgctcggtaaacgtgttgacttctcc
ggccgttccgtaatcgcggtaggaccggatctgaagatgtaccagtgcggtatccctcgt
gaaatggcgatcaacctgttcaagccgtttgtcatcaacgaaatggtcaactcccagctc
gttaccaatgccaaacaggctgaaaagatgatcgaagcacgcgacgagcgtatctggccg
gtcgttgaacaggttatcgacggatatcctgtactgctcaaccgtgcgcctaccctgcac
cgtctgggtatccaggccttccttccaaaactggtagaaggacgtgcaatgcgtctgcat
ccgctggtatgtaccgcgttcaacgccgacttcgacggtgaccagatggcgattcacgta
cctcttggcgaagaagcacgtgcagaagctctggttatgatgctcggttcccacaacatt
ctgggtccgaaagacggcaagcctatcgttacgcctggccaggacatggtcatgggcaac
ttctatctgacgatggaagaaacgaaacaggaactgctcgacgaggctgagcgctaccgc
aaagccggcgtcgaaaaagaagcagcggcatgggaacgctatgccaatgcagaaggtacc
gtttatgcggatgtcgatgaagtcatgctggcttacaagagcggtcaggttcacctgcac
tcccgtatcgcaatcccggtatcgggtctgaacaagacttcctttgacgagtcccacaaa
gatgactacctggctactacagtcggcaaaatcatcttcaacggcatgttccctgcagat
ttcccgtatctgaacgaagtttccactgaaaacttcaaacagactccggagaaatacttc
atcaaaccgggaactgacatcaaagccttcatcaacgatctgccgcttgcagatgcagtt
aagaaaaaagacctcggaaaagttatcgccgaagtcttcaaacgctataaagtcgatgat
gtcgcagacatccttgaccagatcaaatcccttggattccgttattccacagttgcaggt
atcactgtagcgctgtctgacattgaagttgctccgaacaaagaagagcacgtcgatgaa
ggccgtgaaaaagcggatgaactgaaacacttccagcagaagggattcctgaccatgcag
gaatgggagcgtcacctcaacaagctctgggacggtgtcaagaacgatatcgttggcgag
ctgatgagcaaccttccgcgtaaaaacccgatcaacatgatggcgacctccggtgctcga
ggaaacacctcgaactttacccagctcgccggcatgcgtggtctgatggcccgtccggcg
aagggcaaatcaagagccggcgaatatgttccgtccatcatcgaggtacctatttattcg
tgcttccgtgaaggtctgaacgtatccgagttctttatctccacccacggcgtacgtaaa
ggtctgaccgataccgcgctgaagacggctgagtctggttatctgacccgtcgtctggtc
gacgttgcgcaggatgtcatcatcaaagaagacgactgcggaaccgataagggcttctgg
gttgaagatcttgttgaccgcaagaacaacaccgtcatcgaatccctttacgaccgtctg
gtcggccgctattccaaacaggatgttcatcaccctgtaaccggcgagctgatcgttgct
tctgatacttacatgactgaagacatcgcccgcaagattgtcgatgcaggcgtaacaggc
atgtatatccgttctccgtttacctgcaaatccaccaacggtatctgccgcaagtgctat
ggcaagaacatggcaaccggcaaagacgttgaagtcggtgaagctgtcggtacaatggct
gcccagtccatcggtgagcctggtactcagctgaccatgcgtacgttccataccggcggt
gttgccggcggcgacggcggcgatatcacccagggtcttcctcgagttgaggagctgttt
gaggcccgtcatccaaaaggtgtagccgtaatcgcgcagatttccggtgagatcacatcc
atcaaacgtattgatggaacgctccgtcaggaagtcatcatcaaaaacgaaaccgaagaa
gtttcccataagatcaacgcaaaccagacgctgcgtccatgggttgctgaaggcgagcac
atcaaagccggtcagcctctgactgaaggcccgcttgacccgaaagaacttctgcaggtt
gccggtgtcaacgaagttcagaactacattctgaaagaagttaaaaaggtttatcagtcg
cagggtatcgaaatttccgataaacaccttgaggtcatgatccgtcagatgctcaagaag
gttatcgttgtcgacccaggcgacacagacctgaacactggcgttcagctgtccctcaac
aacatcacgcagatcaaccgtgatgcactgttgcagggcaaaactccggctacgttcaaa
ccgatcctgctcggtatctcgaagtcctctgttgagaccgactccttcctgtccgctgca
tccttccaggagaccactaaggttctgaccgatgcaacgatcaaaggcaaagtcgaccac
ctcattggtctgaaagagaatgtcatcatcggtaagctgatcccagctggtaccggatgc
aagggcgaccgtcctcagaatgaggaagtccgcgctatggctgaaaaactccgtcagaaa
cgtcttgcccgtcaggtgacacagcaccatgactccaccttcgaacagttcgcttctacc
gcaatgagcgctccggaaaaaccggatctgctcctgccagaagcaccagaagaccgttcg
atccttgaaaacgactccattctcaatgaccccgaaagcttcgcagaagctctcgagcac
atggaactgaagtag
DBGET
integrated database retrieval system
