Allobaculum mucilyticum: KWG62_10440
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Entry
KWG62_10440 CDS
T08025
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
amuo
Allobaculum mucilyticum
Brite
KEGG Orthology (KO) [BR:
amuo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amuo03032
]
KWG62_10440 (topA)
03400 DNA repair and recombination proteins [BR:
amuo03400
]
KWG62_10440 (topA)
Enzymes [BR:
amuo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KWG62_10440 (topA)
DNA replication proteins [BR:
amuo03032
]
Prokaryotic type
DNA Topoisomerases
KWG62_10440 (topA)
DNA repair and recombination proteins [BR:
amuo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KWG62_10440 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF1272
Zn_ribbon_PaaD
Zn_ribbon_8
DNA_ligase_ZBD
DUF7340
Zn_ribbon_recom
Toprim_C_rpt
Zn_Ribbon_YjdM
Toprim_4
DUF5795
Lar_restr_allev
Zn_ribbon_InsA
Motif
Other DBs
NCBI-ProteinID:
UNT95716
LinkDB
All DBs
Position
2508867..2511074
Genome browser
AA seq
735 aa
AA seq
DB search
MKKKLVIVESPSKAKTIEKYLGTDYKVVSSKGHICDLATSGKGGLGIDIEHDFKPTYRIS
KEKKEVVKELKNLASNADSVILASDPDREGEAIAWHLARELGLSTEDNNRVTFHEITKPV
VTQAIQDPHKIDMDLVRSQEARRILDRIIGFKLSKLLQNKIQSKSAGRVQSVALRLIVER
EEEIRKFVPEEYWSVEAKVKKGNQTFEASLTKVDGKKAEIHNEQEAQEILDRARSHPFTV
VSVTSRKKNKPPKLPFTTSTLQQESSTKLGYGAKKTMSIAQKLYEGVDLGGTTTGLISYM
RTDSTRLSPLFVSDTETYIADTFGKEYSGTAHQKNSTNAQDAHEAIRPTDIHQTPEAVKP
YLTNEQYRLYSMIYARTLASLMADAKFDVTSAKFAADGCEFSASGQTMVFDGYTKVYSKY
EKQTTTLLPKLKPEEVLPNTTIDASQHFTEPPARYTEARLIKELEEKSIGRPSTYASIID
TLQKRAYVTLEKTSETSKTKVFRPTEQGELTNSKLQEFFKKIINVQYTADMEKNLDIIAE
GSEDYIQFLRDFYDDFEPLVEKAYEKMPKKELEKVGRACPECGGDLVYRNGRFGKFISCI
NYPTCKYTENADDTLAELEKTEKICPECGSRMQIKKGRFGPFWACTAYPECKHIEPLKEK
AKPKPTGEICPECGSELVERVSRYGKTFIGCSNYPKCRYIKKTPKAAKKEQDAAEQTAVD
TAAENTVEAPVENAA
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaaaaaacttgtcattgtcgagtcgccttccaaagcgaagacaattgaaaaatat
ttaggcactgactataaagtcgtttcatcaaaaggtcacatctgcgacctggcaacttcc
ggaaaaggcggattgggtattgatatcgaacatgatttcaaaccgacctaccgcatttcc
aaggaaaagaaagaagtcgtcaaggaactcaagaatcttgcctccaacgcagacagcgtc
attctggcaagcgacccggaccgtgaaggagaagcgatcgcatggcatctggccagagag
ctcggcctgtccacggaagacaacaaccgggtaacgttccacgaaatcaccaagccggtt
gttacgcaggccattcaggatccgcacaagatcgatatggatctcgtgcgctctcaggaa
gcccgccgtattcttgaccgcattatcggctttaagttgtccaaactgctgcagaacaaa
attcagtccaagtctgccggccgcgttcagtcggttgcactccgtctgattgttgagcgc
gaagaagaaatccgtaaattcgtgccggaagagtactggagcgttgaagccaaagttaaa
aaaggcaatcagacgtttgaagccagtctgacgaaagtcgacggcaagaaagcggaaatc
cataacgagcaggaagcacaggaaattcttgaccgcgccagaagccatccgtttacggtc
gtttctgtaacaagccgcaagaagaacaaaccgccaaaactgccttttaccacatcgaca
ctccagcaggaatcctcaaccaaacttggctatggcgccaagaagacgatgagcattgct
cagaagctgtatgaaggtgttgatcttggcggtacgacaaccggtctgatttcctatatg
cgtaccgattcgacccgtctgtccccgcttttcgtttcggataccgaaacctatatcgcg
gatacattcggaaaagagtacagcggtaccgctcatcagaaaaactccaccaatgcccag
gatgcccatgaagccatccgtccgacggatattcatcagactcctgaagctgttaagcca
tacctgaccaacgaacagtaccgtctgtattcgatgatctatgcccgcacactcgcatcc
ctgatggctgatgccaaattcgatgtgaccagcgccaagtttgcggctgatggctgcgaa
ttctctgcaagcggtcagaccatggtgttcgacggttatacaaaggtctattccaaatat
gaaaagcagacgaccactctgctgccaaagctgaaaccggaagaagttctgcccaacacc
actattgatgcctcgcagcacttcaccgaaccgccagcacgctatacagaagcccgtctg
atcaaggaactcgaagaaaagagcatcggccgtccttcgacctatgcttcgatcatcgat
accctgcagaagcgcgcttacgttacccttgaaaaaacaagcgagacatccaagacgaaa
gtcttccgtccgactgaacagggtgagctgaccaactccaaactgcaggagttcttcaag
aagatcatcaatgtccagtacacagcggacatggaaaagaacctcgatatcatcgcagag
ggaagcgaggactatattcagttcctgcgcgatttctatgatgattttgaaccgctcgtt
gaaaaggcatacgaaaagatgccgaagaaggaactcgaaaaagtcggccgggcctgcccg
gaatgcggcggcgatctggtctaccgcaacggacgtttcggcaagttcatctcctgcatc
aactacccgacctgcaaatatacggaaaacgcagacgacacccttgcagagctcgaaaag
acagagaaaatctgtccggaatgcggcagccgcatgcagatcaaaaaaggccgcttcggt
ccgttctgggcgtgcacagcctatccggagtgcaagcacatcgaaccgctgaaagaaaaa
gccaaaccaaagccgaccggtgaaatctgcccggaatgcggaagcgagctcgttgagcgc
gtaagccgctatggcaagacatttatcggctgctcgaactacccgaaatgccgctacatc
aaaaagacgccaaaggctgctaaaaaagagcaggatgccgctgaacagactgcggtagat
accgcggctgaaaataccgtcgaagctcctgtggagaatgcagcatga
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