Acutalibacter muris: ADH66_01910
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Entry
ADH66_01910 CDS
T09764
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
amur
Acutalibacter muris
Pathway
amur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ADH66_01910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amur03019
]
ADH66_01910
03016 Transfer RNA biogenesis [BR:
amur03016
]
ADH66_01910
Enzymes [BR:
amur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ADH66_01910
Messenger RNA biogenesis [BR:
amur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ADH66_01910
Transfer RNA biogenesis [BR:
amur03016
]
Prokaryotic type
tRNA degradation factors
ADH66_01910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
RNase_II_C_S1
Tricorn_C1
EXOC6_Sec15_N
Motif
Other DBs
NCBI-ProteinID:
ASB39519
UniProt:
A0A1Z2XM49
LinkDB
All DBs
Position
complement(386906..389116)
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AA seq
736 aa
AA seq
DB search
MKNNRGPHKGGRGFGEPRRVFGAPAEDAYRLPSAASTPEELLLLGALKRCGGDGVPSKSL
QREAGIRDKDSFYKALKSLEELKEVTVDKDHWVKLVPPAKEIEAEIVSLSARFGFAKPKI
GEDIFIPGRDLNGAFLGDKVILWDLQKRDRGPSGKVKRIVERKENKLTGTVHINEHGSAV
VTPDGPVRYDMEVQAARLGGAKDGDKVLIEPIQDGRGDWSQAAVKYVFGTGDRARVCADA
IIERCGIPTKFPSEVMAQAEKISRMTVTQADIDERLDLRDEPIFTIDSADAKDLDDAVSA
MKTVDGYTLGVHIADVSHYVKAGTPIDTEAFLRGTSVYFADRVIPMLPEALSNGVCSLNA
GTEKLTFSALMDFDLDGNMIDYRFEKTVINSKVRGVYSEVNEIFKGTASPKILEKYSPVM
DSLMAAKELADILQHNGKSRGQMDLTSDETKFLLNEDGVCIDLLPRTQGISEELIEQLMV
AANCAAAKASLDAEIPFLYRVHEKPNPDRVYELCDLFDRLGVKCGELKKGSPSAKDFAEV
LSRVKGTGKESLVNQRILRTMDKARYDHRELGHFGLALNEYSHFTSPIRRYPDTSIHRIL
SDVVRGEDKGSIRKKYKTFAEESAIESSKNEVRAVTGERDAEDCYMAEYMRAHLGEHHVG
VINGVTPKGIFVKLQNNAEGFISLGDFESCDFEFDGEICHKCRRSGKTLMMGQELAIIIA
GADVATGRIDFMPEEP
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacaacagaggaccacataagggcggccgcggcttcggcgaaccccgccgggta
ttcggcgcccccgctgaggacgcctaccggctgcccagcgccgccagcacccccgaggag
ctgctcctgcttggcgctctcaagcgctgcggcggggacggcgtacccagcaagtccctc
cagcgggaggcgggcatacgcgacaaggacagcttctacaaggccttaaagagccttgag
gaactgaaggaggtcacggtagacaaggaccactgggtaaagcttgtgcccccggcaaag
gagatagaagcggaaatagtctctctctccgcccgcttcggcttcgcaaagccgaagatc
ggcgaggacatctttatccccggccgggatctgaacggcgcgtttctgggggataaggtg
atactctgggacctgcaaaagcgggacagggggcctagcggcaaggtcaagcgcatagtg
gagcgcaaggagaataagctcaccggcacggtgcacataaacgagcacggctccgctgtt
gtgacccccgacggccctgtgcgctatgatatggaggtccaggccgcaaggcttggcggc
gcaaaggacggcgacaaggtgctcatagagcccatacaggacggccgaggggactggagc
caggccgccgtgaaatatgttttcggcaccggggaccgggctcgggtatgcgccgacgct
ataatagagcgctgcggcatacctacgaagttcccctccgaggtcatggcccaggcggag
aagatatcccgaatgaccgtaacccaggcggatatagacgagcgcctggaccttcgggac
gagcccatcttcaccatcgacagcgccgacgcaaaggacctggacgacgcggtgtcagcc
atgaagaccgttgacggctacaccctgggggtgcacatcgcggacgtgtcccactatgtg
aaggcgggcacgcccatcgacaccgaggcctttctccggggcacctcggtgtactttgcg
gaccgggtgatacccatgcttcccgaagccctctcaaacggcgtttgctctctgaatgcg
ggcaccgagaagctgaccttttcggcgctgatggatttcgaccttgacggcaatatgata
gactaccgctttgaaaagacggttataaactcaaaggtccggggcgtgtacagcgaggta
aacgagatttttaagggcactgcgagcccaaagatactggaaaaatactccccggtcatg
gacagccttatggccgccaaggaacttgcggatattttgcagcataacggcaaatcccgg
ggccagatggacctgaccagcgacgagaccaagttcctcctcaacgaggacggcgtgtgc
atagacctgctgccccgcacccagggcatatccgaggagcttatcgagcagctgatggtg
gccgccaactgcgccgccgccaaggccagccttgacgcggagatacccttcctatacaga
gtccacgagaagcccaaccccgacagggtctatgagctctgcgacctctttgaccggctg
ggggtaaaatgcggcgagcttaaaaagggcagtcccagcgcaaaggacttcgcggaagtc
ctcagtcgggtaaagggcaccgggaaggagtcccttgtaaaccagcgtatactgcgcacc
atggacaaggcccggtacgaccaccgggagcttggccacttcggcctggctctaaatgag
tacagccacttcacctcccccatacgccgctatccggacacctctatccaccgcattttg
agcgatgttgtccggggcgaggataaggggagcatacgaaagaagtacaagacctttgcc
gaggagtcggccatagagagctccaagaacgaggtcagagccgtcaccggcgaacgggac
gcggaggactgctatatggccgaatatatgcgggctcacctgggcgagcatcatgttggg
gtcataaacggcgttaccccgaagggcatatttgtaaagcttcagaacaacgccgagggc
tttataagccttggggatttcgagagctgtgacttcgagttcgacggcgagatctgccat
aagtgccgccgcagcggaaagaccctgatgatgggccaggagctggccattattatcgcc
ggggcggacgtggccaccgggcgcatagactttatgcccgaggagccgtga
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