Akanthomyces muscarius: LMH87_000427
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Entry
LMH87_000427 CDS
T09501
Name
(RefSeq) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
amus
Akanthomyces muscarius
Pathway
amus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LMH87_000427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amus03041
]
LMH87_000427
03009 Ribosome biogenesis [BR:
amus03009
]
LMH87_000427
Enzymes [BR:
amus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
LMH87_000427
Spliceosome [BR:
amus03041
]
Complex A
U2 snRNP components
U2 related factors
LMH87_000427
Complex B
LMH87_000427
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
LMH87_000427
Ribosome biogenesis [BR:
amus03009
]
Eukaryotic type
90S particles
Helicases
LMH87_000427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
HA2_N
SRP54
AAA_19
T2SSE
AAA
Flavi_DEAD
NB-ARC
Motif
Other DBs
NCBI-GeneID:
80887586
NCBI-ProteinID:
XP_056055294
LinkDB
All DBs
Position
6:1220426..1222908
Genome browser
AA seq
767 aa
AA seq
DB search
MPDTAGDKRSSADSDGASRKKMKKEEKPNPYLAHMYENGDDEDYEDGAEEMPAHSPLAGM
KRRATTAKQAEKREDLDANPFTGRAHSQKYFQILQGRRDLPVHKQRQEFLDKYHSTQILV
FVGETGSGKTTQIPQYVVYDELPQLNRKLIACTQPRRVAATSVAQRVADEMDVTLGEEVG
YNVRFDDMSGPKTLLKYMTDGMLLREAMHDHDMSRYSCIILDEAHERTLATDILMALLKQ
VAARRPDLKIIVMSATLDAQKFQRYFNDAPLLTVPGRTHPVEIFYTPEPEKDYVEAAIRT
VLQIHASEPEGDILLFLTGEDEIEDSCRKIALEAEELIREVDAGPLVVYPLYGTLPPHQQ
QKIFDKPPPALRKGGRPGRKVIISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESL
LVSPISKASAQQRAGRAGRTKPGKCFRLYTEKAFKKELIEQTYPEILRSNLANTVLELKK
LGVEDLVHFDLMDPPAPETMMRALEELNYLACLDDDGELTALGSLASEFPLDPALAVMLI
SSPEFYCSNEILSLTSLLSVPQVFVRPANNRKRADEMKSHFSHPDGDHLTMLNVYHAYKG
QQASDPNSVKNWCHEHFLSHRHLSSADSVRAQLKRTMEVQGLELISTPFEDKNYYTNIRR
SLLSGFFMQVAMKESSGKIYRTVKDDQAVLIHPSTVLRTEFDWVVYHEFVLTSKQYIRTC
TGIRPEWLLDIAPTYYDPENMDQPDIKRALVRAAEKKRRKAAMRTDK
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatactgccggcgacaagcgaagcagtgccgattccgacggcgcttccaggaag
aagatgaagaaggaggaaaagccgaacccgtacctggcgcacatgtacgagaatggagat
gacgaagattacgaagacggcgctgaagagatgcctgcgcattcgcctctggcgggcatg
aagcgccgtgccacaacggcaaagcaggctgaaaagcgcgaagatttggacgcgaatccc
ttcacagggcgtgcacactcacagaagtactttcagattctgcaaggtcgccgagacttg
cccgtccataaacaaaggcaggaattcctcgacaagtaccattcgacccagatcctcgtc
tttgtcggtgagacgggttccggaaagactacgcagatcccgcaatatgtcgtctacgat
gagctaccccagctcaaccgcaagctcattgcctgtacgcaaccccgacgagtcgccgcc
acctcggtagcccagcgtgtcgccgacgagatggacgtgaccttgggcgaggaagtcggt
tacaatgttcgatttgacgacatgtcgggccccaagacgctcctcaagtacatgacggac
ggtatgcttctgcgcgaggccatgcacgaccacgacatgtcgcgctacagctgcatcatt
ctcgacgaggcgcacgagagaacgctcgcgaccgatatcctcatggcgctgctcaagcaa
gtcgccgcccgccgccccgacctcaaaatcattgtcatgtccgccacgctggacgcgcaa
aagttccagcgctacttcaacgatgcgccgctgctcacggtccccggccgcacgcacccc
gtcgagatcttttacacgcccgaacccgaaaaggactacgtcgaggccgccatccgcacc
gtgctgcagatccacgcctcagagcccgagggtgatatcctgctcttcctcacgggcgag
gacgagattgaagactcgtgtcgcaaaattgcgctcgaggccgaggagctaatacgagaa
gttgacgccgggccgctcgtcgtctacccgctgtacggcaccctccctccgcaccagcag
caaaagatctttgacaagccgccgccggcgctgcgcaagggcggccgtcccggccgcaaa
gttatcatctcgaccaacatcgccgagacgtcgctgaccattgacggcatcgtctacgtc
gtggacccgggcttcagcaagcaaaagatttataacccgcgcattcgcgtcgagtcgctg
ctcgtatcgcccatctccaaggcctcggcgcagcagcgtgccggtcgtgccggccgtacc
aagcccggtaaatgcttccgcctgtacacggaaaaggcgttcaagaaggagctcatcgag
cagacgtaccccgagatcttgcgctccaacctcgccaatacggtgctggagctcaagaag
ctgggcgtcgaggacctggtgcactttgacctgatggacccgccggcgcccgagacgatg
atgcgcgcgctcgaggagctcaactacctggcgtgcctggacgacgacggcgagctgacg
gcgctcggctccctggcgtccgagttcccgctggacccggcgctggccgtcatgctcatc
tcgtcgcccgagttctactgctccaacgagatcctgagcctgacgtcgctgctgtcggtg
ccgcaggtctttgtgcgcccggccaacaaccgcaagcgcgccgacgagatgaagtcgcac
tttagccaccccgacggcgaccacctgaccatgctcaatgtgtaccacgcctacaagggc
cagcaggcctcggaccccaactcggtcaagaactggtgccacgagcactttctctcgcac
cgccacctctcgagcgccgacagcgtgcgcgcgcagctcaagcgcaccatggaggtgcag
ggcctggagctcatctcgacaccattcgaggacaagaactactacaccaacatccgccgc
tccctgctctcgggcttcttcatgcaagtcgccatgaaggagagctcgggcaagatctac
cggacggtcaaggacgaccaggccgtgctgatccacccgtcgacggtgctgcggaccgag
tttgactgggtcgtgtaccacgagtttgtcctgacgtcgaagcaatatatccgcacctgt
acgggcatccgtcccgagtggctactggatattgcccccacgtactacgacccggagaac
atggaccagccagacattaagcgggctctggtccgggctgcggagaagaagcgcagaaag
gcggccatgcgcaccgacaaatga
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integrated database retrieval system
