Akanthomyces muscarius: LMH87_000455
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Entry
LMH87_000455 CDS
T09501
Name
(RefSeq) hypothetical protein
KO
K12601
superkiller protein 8
Organism
amus
Akanthomyces muscarius
Pathway
amus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMH87_000455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amus03019
]
LMH87_000455
Messenger RNA biogenesis [BR:
amus03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
LMH87_000455
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
eIF2A
MIOS_WD40
WD40_like
WDR54
PALB2_WD40
Nup160
Cytochrom_D1
Nucleoporin_N
DUF4987
Motif
Other DBs
NCBI-GeneID:
80887614
NCBI-ProteinID:
XP_056055323
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All DBs
Position
6:1286317..1287448
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AA seq
318 aa
AA seq
DB search
MSKQYLTTHTVDNAHITDIFALASTPKALLSAGGSSAIHVHDTTDPAFPLKQSISNAHKL
GCHHLCTSRNGRYAASAGFGGEVKIWALNPDTGEWSNTGEITGASVQAGEVWALALSEDG
GYLASTTNDGRINVWDVVDEGKPKIREYETGSSGSGSFGMCVDLSRDGKFTASGHQNGAI
YIFDNDTGRILYSLSGLAKPVRAVAFSPGNTRLAAAGDAGIIALYDMKHGEHIGNLTGHS
SWITTIDWSDTGEYLLSGSMDGKVKVWSVERSDCVATHSETDKALWAVRWLPKTGRSEMF
CTAGANRSLTFYREATGG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcaatatctgacaacgcataccgtcgacaatgcacacataacggacattttc
gccttggcttcgacgccaaaggcgcttctctctgccggtggctcttctgccatccatgtt
cacgacaccacagacccagcgtttcccctcaagcagagcatatcaaacgctcacaagctc
ggctgccaccacctctgcacatcgaggaatggccggtacgccgccagcgcagggttcgga
ggtgaagtcaagatttgggcgctcaacccagacactggggaatggagcaacacgggtgag
ataaccggtgcctctgtccaggcgggcgaggtctgggcgctggcgcttagcgaagacggc
ggttacctggccagcactaccaatgacggcaggatcaacgtctgggatgttgtcgatgag
ggtaagcccaagattcgcgaatacgagactggcagctcaggatcaggaagctttggcatg
tgcgtcgaccttagcagagacggaaagttcactgccagcggtcatcaaaacggcgccatc
tacatcttcgacaatgatacgggacgcatcctttactccctctctggactggcgaagcct
gttcgcgctgttgccttttcgcctggaaatacgagactagcggctgccggtgatgctggc
atcattgccctgtacgacatgaagcacggagaacacattggcaacctgactggccactct
tcctggatcacaaccattgactggagcgacactggcgagtatctcctaagtggatccatg
gatggcaaggtcaaggtatggtccgtcgagcgaagtgactgcgtggcgacgcacagcgag
acggacaaggcgctctgggcagttcgctggctgcccaagactggccgtagcgagatgttt
tgcacagccggcgccaacaggagtctgacattttaccgtgaggctacaggcggttag
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