Akanthomyces muscarius: LMH87_000514
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Entry
LMH87_000514 CDS
T09501
Name
(RefSeq) hypothetical protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
amus
Akanthomyces muscarius
Pathway
amus03022
Basal transcription factors
amus03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amus00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LMH87_000514
09124 Replication and repair
03420 Nucleotide excision repair
LMH87_000514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amus03021
]
LMH87_000514
03400 DNA repair and recombination proteins [BR:
amus03400
]
LMH87_000514
Transcription machinery [BR:
amus03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LMH87_000514
DNA repair and recombination proteins [BR:
amus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LMH87_000514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Motif
Other DBs
NCBI-GeneID:
80887673
NCBI-ProteinID:
XP_056055382
LinkDB
All DBs
Position
6:complement(1472554..1474163)
Genome browser
AA seq
510 aa
AA seq
DB search
MADSDGEFVDDNLSDDLMDHTIEGEDDEPDDHHASASGGRPSRSGGKSGGGRPKRGKKDA
GGRKKNAAQAWEQSKRTWEMDLPEEGEDGMLDLTTLEAEKRRRLMRDTTPLQRGIIRHLV
LVLDMSFAMADKDMLPTRYRLTLRYAAAFVREFFEQNPISQLGIVGMRDGVAVRVSDLGG
NPAEHLEHLKELEGQDPQGNPSLQNALEMCRGALFHAPSHGTREVLIIYGALLSSDPGDI
HDTITSLISDRIRVSIVGLSAHLSICAELCSRTNAGDASQYNVVMDEVHFKELFLAATTP
PITRTKEQSTPSLLMMGFPSRVLAPGGATSYCACHNRPCREGFLCTRCGSRVCRLPAECP
SCALTLILSTHLARSYHHLFPLRNWVEVPWTEAARSTACFACQCPFPAPPTTTRKTTEGA
AGGGVNGDVAASAREGDQRPAAKGVSESARYACEVCGNHFCIDCDVYAHEIVHNCPGCQS
NAPPPQEDAAYTNGHGLSNGHTNGAMVIDA
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggccgactccgacggcgagtttgtcgacgacaacctgtcggacgacctcatggaccac
accatcgaaggtgaagacgacgagcccgacgaccaccatgcctcggcgagcggcggccgg
ccgtcacgatccggcggcaaatccggcggcggacgaccgaagcgcggcaaaaaggacgcc
ggcggccgcaagaagaacgcggcgcaggcgtgggagcagtcgaagcggacgtgggagatg
gacctgcccgaggagggcgaggacgggatgctggacctgacgacgctcgaggcggagaag
cggcggcggctgatgcgcgacacgacgccgctgcagcgcggcatcatccggcacctggtg
ctggtgctcgacatgtcgttcgccatggcagacaaggacatgctgcccacgcggtaccgc
ctgacgctgcgctacgcggccgcctttgtgcgcgagttctttgagcagaaccccatctcc
cagctgggcatcgtcggcatgcgcgacggcgtggcggtgcgcgtcagcgacctcggcggc
aacccggccgagcacctcgagcacctcaaggagctggagggccaggatccgcaggggaac
ccgagtctgcagaatgcgctggaaatgtgccgcggtgcgctattccatgcaccgtcacac
ggcacgagagaggtcctcatcatctacggggcgctcctgtccagcgacccgggcgacatc
cacgacacgataaccagcctgatctcggaccgcatccgcgtgtccatcgtgggcctgtcg
gcgcacctgtccatctgcgcggagctgtgctcgcggaccaacgcgggcgacgcgtcgcag
tacaacgtcgtcatggacgaggtgcacttcaaggagctcttcctggcggccacgacgccg
cccatcacgcggaccaaggagcagagcacgcccagcctgctgatgatgggcttcccttcc
cgcgtgctcgcgcccggcggcgccacgagctactgcgcgtgccacaaccggccctgccgc
gagggcttcctctgcacgcgctgcgggagccgcgtctgccgcctgcccgccgagtgcccg
tcgtgcgcgctgacgctcatcctgtcgacgcacctggcgcgctcctaccaccacctgttt
ccgctccgcaactgggtcgaggtgccgtggacggaggcggcgcgctcgacggcgtgcttt
gcgtgccagtgtccctttcccgcgccgccgacgacgacgcgaaagacgacggagggggcc
gccggcggtggtgtcaatggagatgtggcggcgtcggccagagaaggggaccagcggcca
gcggccaagggcgtgagcgaaagcgcgcggtatgcgtgcgaggtgtgcggaaaccacttt
tgcatcgactgcgacgtgtatgcccacgagattgtgcacaactgcccgggctgccagagc
aacgcgccgccgccgcaagaggacgctgcgtatacgaatggacatggcctgagcaatggg
cataccaacggcgccatggtgattgatgcgtga
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