Akanthomyces muscarius: LMH87_000867 Help Entry LMH87_000867      CDS       T09501                                  Name (RefSeq) hypothetical protein   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism amus  Akanthomyces muscarius Pathway amus03013   Nucleocytoplasmic transport amus03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:amus00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     LMH87_000867    03015 mRNA surveillance pathway     LMH87_000867  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:amus03019]     LMH87_000867 Enzymes [BR:amus01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      LMH87_000867     5.6.2.5  RNA 5'-3' helicase      LMH87_000867 Messenger RNA biogenesis [BR:amus03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      LMH87_000867    mRNA cycle factors     Common to processing body (P body) and stress granule      LMH87_000867 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UPF1_Zn_bind AAA_12 AAA_11 UPF1_1B_dom AAA_30 AAA_19 ResIII DEAD UvrD-helicase SLFN-g3_helicase Viral_helicase1 NPHP3_N PIF1 Helicase_RecD nSTAND3 ATPase AAA_22 Ribosomal_S13_N SRP54 AAA_16 PhoH AAA_10 AAA_25 Motif Other DBs NCBI-GeneID:  80888026 NCBI-ProteinID:  XP_056055755 UniProt:  A0A9W8UP79 LinkDB All DBs Position 6:2461291..2464853 Genome browser AA seq 1050 aa AA seqDB search MIACLAIIDILERKLQPPPPDRGGSKQHGGSLHPFDEMVGLNLNNTEEEKELPAYACAYC GIHAPASVVKCLICNKWFCSARGNSTSSHIINHLVRARHKEVQLHPESALGDTVLECYSC GTKNSFLLGFIPAKSDSVVVLLCRQPCAASASNKDMNWDPSRWEPLIKERAFLDWLVSAP SEAEQLRARHMSPNTIARLEEMWKLEPNATISDLDKGQTVDDDPEPVLLKYEDAFHYQNT FGPLVKMESDYDKKLKEAQSEDNLKVEWSQGLNNKHLASFNLRKIESGEVKLAVGDEMLL RYNGELREPWQGVGYVMKIPNSQSDEVCLELRKTGNDRSVPTDLSHNFSADYVWKATSYD RMQLAMKTFAVDDMSVSGFIFHTLLGHDVQLQPMKSNLPKKWSAPGLPDLNQSQVDAIKS VLQKPLSLIQGPPGTGKTVTSATIIYHLSKMSGNQVLVCAPSNVAVDQLCERIHRTGLKV VRLTAKSREDVESSVSFLALHEQVRMSEHNTEFAKLSQLKSEAGELSSQDEKKFRQLTKA AEREILNNADVVCCTCVGAGDPRLSKLKFRSVLIDESTQSAEPECIIPLMLGCKQVVLVG DHKQLGPVIMNKKAAKAGLSQSLFERLMQLRLQPILLNTQYRMHPCLSEFPSNMFYDGSL QNGVTQEQRIRKDVDFPWPVAEMPMMFWSNIGNEEISTSGTSYLNRTEASNVEKIVTRFF KAGVKPSEIGVITPYEGQRSYIVTTMQNSGTSKKEHYKSVEVASVDAFQGREKDFIVLSC VRSNENQGIGFLSDPRRLNVALTRAKYGVVILGNPRVLSKHELWYNLLTHFRDRRCFVEG PLNNFQQCLLQFSKPRSHRQKPTNQLPVGGFQNQNGRFNGAGTGTGTMRDFDSGSMMSYV PDDVSSIHGSTFGGAALNTAFPAMFSSFAPEQWPGLPGVGGQGARGGKSRARAAESVTGE SVANSETTDASSSIIGSRGVGQGGVSLGAGLQDAVTGMRAISYTQSDRLRQYVESGARMP AGNRYAGRRYDDDEKSVSTAFHSQVGGGYD NT seq 3153 nt NT seq  +upstreamnt  +downstreamnt atgatagcttgtctggcaataattgacattcttgaaagaaaattgcaaccgccacctccc gaccgcggcggttccaagcaacatggagggagccttcacccattcgacgaaatggttggg ctaaacctcaataacaccgaggaggagaaagagctccccgcgtacgcatgcgcttattgc ggtattcacgctccggcctctgtcgtcaagtgtttgatctgcaacaaatggttttgcagc gcccgcggcaacagcacgtcctcccacattatcaaccatctcgtccgagcccgccacaag gaagttcagcttcaccccgagtccgctctcggcgataccgtactcgaatgctatagctgc ggcactaagaactcatttttgcttggcttcatccctgcaaagtctgactctgtcgttgtt ttgctgtgccgccagccttgcgccgcatcggcctccaacaaggacatgaactgggatccc tcccgctgggagccgttgatcaaggagcgagcgttcctcgattggcttgtcagcgctccc tccgaagccgagcagctgcgcgcccgccacatgtctcccaacaccatcgctcgcctcgag gagatgtggaagttggaacccaacgccaccatttccgatctcgacaaagggcaaactgtt gacgacgatccggaacccgtactcttgaaatacgaagatgcattccactaccaaaacact tttggaccgcttgtgaaaatggaatccgactatgacaaaaagctcaaggaagcgcagtcc gaagacaacttgaaagtggaatggtcgcaaggtctcaacaacaagcatcttgcttccttt aacttgcgcaagattgagtccggagaagttaagcttgctgttggtgacgaaatgttgctt cgctacaacggtgagctcagggaaccttggcaaggtgtaggctacgtcatgaagattccc aacagtcagtctgacgaggtttgtcttgagctacgtaagactggcaacgacagatcggtc ccaaccgacctttcccacaacttctcggccgactatgtctggaaggccacctcgtacgac cgtatgcagcttgccatgaagacttttgctgtcgacgacatgagtgtctctggcttcatt ttccatacattgcttggtcacgacgttcagctgcagccgatgaagtccaacctgcctaag aagtggtctgcgccaggtctgccagatttgaaccagagtcaagtcgacgcgatcaaatcg gttctgcagaagccgcttagtcttattcagggccctcctggtactggtaagacggtgaca tctgctaccatcatctatcacttgtccaagatgagcggaaaccaggttctcgtctgcgca ccttctaacgttgctgttgatcagctttgcgagcgtattcaccgcaccggtctcaaggtc gttcggctgactgccaaatcccgtgaagatgtcgagtcttctgtgagcttccttgctctt cacgagcaggtgcgaatgtcagagcacaatacagagttcgcgaagctgtcacagctcaag agcgaggctggcgaactgtccagccaagatgaaaagaagtttaggcagttgacaaaggcg gccgaacgagaaattctcaacaacgccgacgttgtctgctgtacctgtgttggtgctggc gaccctcgtctgtccaaactcaagttccgtagcgtactcatcgacgagtctactcagtcg gccgagcccgaatgcatcatcccgctcatgctgggctgcaagcaggttgtccttgtcggc gatcacaagcagctcggccccgtcattatgaacaagaaagccgccaaggctggcctcagc caatccctgtttgagcgcctcatgcagcttcgccttcagcccattctcctcaacactcag taccgaatgcatccctgcctgtcagagttcccctccaacatgttttatgacggcagcttg cagaatggtgtcacgcaagagcagagaatccgaaaggatgttgactttccctggcctgtt gccgagatgcccatgatgttctggtccaatatcggcaacgaagaaatttctaccagcggc acctcgtatctcaatcgaacggaagcctccaatgtcgaaaagattgtcacccgattcttc aaggcaggcgtcaaaccctccgagatcggcgttattacgccatacgagggccagcgaagc tacattgttacgactatgcaaaattcgggcacctccaagaaggagcactacaagagtgtc gaagtcgcgtctgtcgatgcctttcagggccgtgaaaaggacttcattgtcctctcctgc gtgcgttccaacgagaaccaaggcattggtttcttgtctgatcctcgccgcctgaatgtc gcccttacccgtgccaagtacggtgtggttattcttggtaaccccagggtactttccaag cacgagctctggtacaacctgctcacccacttccgtgaccgtcgctgcttcgtcgagggc cccttaaacaacttccagcagtgtcttcttcagttcagcaagccccgatcgcaccgtcag aagcccaccaatcagcttccggtcggtggcttccagaaccagaacggacgcttcaatggc gcgggcacgggcacgggcacgatgcgcgactttgactctggctccatgatgtcctacgtc cccgacgacgtctcctccatccatggctcgacctttggcggcgctgccctcaacacggcg ttccctgccatgttctccagctttgcccccgagcagtggccaggtctgcctggcgtcggt ggccagggtgctcgtggcggaaagagtcgcgctcgcgctgccgaaagtgtcaccggtgag agcgtggccaattcagagaccacagacgcgtcgtctagcattattggcagtcgcggcgtg ggccagggcggtgtaagtctcggcgccggtctgcaggatgccgtcacgggcatgcgcgcc atctcctacacccagagcgatcgtctgcgccagtacgtcgagagcggcgcccgcatgccc gctggtaatcgctacgccggtcgccgctatgatgacgatgagaagagcgtcagcaccgct ttccacagccaggtcggaggtggctatgactga

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