Akanthomyces muscarius: LMH87_001930
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Entry
LMH87_001930 CDS
T09501
Name
(RefSeq) hypothetical protein
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
amus
Akanthomyces muscarius
Pathway
amus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMH87_001930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amus03019
]
LMH87_001930
Messenger RNA biogenesis [BR:
amus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
LMH87_001930
mRNA degradation factors
3'-5' decay
Pan complex
LMH87_001930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
zf-CCCH
PK_Tyr_Ser-Thr
Motif
Other DBs
NCBI-GeneID:
80889089
NCBI-ProteinID:
XP_056050350
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Position
3:1842738..1845006
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AA seq
645 aa
AA seq
DB search
MAAPRYQSSELRRQVGSPRVKTRENKETLCRNVLIYGHCRYEDQGCTFSHEQNKGNNQNQ
NQQDSSKKSFNVESPSFTPANLGPAAAVKKSFTSQAANAPAFTPRGIAGAATPVEGDAVF
NPAAIREFTPSFDANVSATTANGGPPDGPVSFDPFNMGAVAQGLPAAQFNPYAENHGGLS
GAAQQFYQGAGAFSAPLQPLQYHLYAPVGPHREDLMQYHRVTHDFFIPEKLREDMQRKSE
ASLQVMPNSQLPQLDNYHSLVALDTSQRKNVSIFGYPSWVYKATSSKTGNNYCLRRIEGF
RLTNEHAIRSVKEWRRIDNANVVTIHDAFTARAFGDSSLIFVQDYHPLAKSLAEHHLTAN
PVHGQRFQPKSPISEAVLWGYISQIANALKAIHSSNLAARCIDVSKILVTGKNRIRLNAC
SILDVVQFENRRPLPELQQDDFVQFGRTMLCLATGTLPAHLNNITSSLEQMSRTYSAELR
DTIIWLFTPAQTPAQKTIDEFIRGVAGHIVTSLDQSQHQADELNTELYRELENGRIARLL
MKLGAVNERQEFDGDRAWSENGERYMLKLFRDHVFHQVDSNNNPVLDVGHMLRNLNKLDA
GTDEKICLTSRDEQTSFIVSYKELKKQLASAFNDLQKGSKQARGI
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccccgataccaatctagcgagctgcggcgccaggtcggttcgccgagagtg
aaaacccgagaaaacaaggaaaccctctgccgaaacgtcttgatatatggccattgccgc
tacgaagaccaaggctgcaccttctcacacgagcagaataaaggaaacaaccaaaaccaa
aaccaacaagactcatccaaaaaatccttcaatgtcgagtcgccctcatttaccccagcc
aatcttgggcctgcggcggccgtcaagaagtccttcacctcgcaggctgccaatgcgccg
gcgtttacccctcgcggaatagcgggcgctgcaacgccagtcgagggggatgccgtcttc
aatcccgccgccattcgcgagttcacgccgtcgtttgacgcaaatgtttctgccacaact
gccaacggaggccctcccgacggccccgtgtcgtttgaccccttcaatatgggggctgtc
gctcagggccttccagccgcacagttcaacccatatgcagagaaccacggaggcttgtcc
ggagcagcgcagcagttctaccaaggagcaggcgcattctcagcgccgctacagccacta
caatatcatctatatgcacccgttggaccgcatcgcgaagatctcatgcagtaccaccgt
gtcacacacgactttttcatccccgagaagttacgggaagatatgcagcgcaagtcggaa
gcgtcgcttcaagtcatgcccaattcccagctgccgcagctggacaattaccactcgcta
gttgcgctcgatacgagccagcgcaaaaatgtcagcatattcggataccccagctgggtt
tacaaagcgacgtcgtccaaaactggcaacaattactgtctgcgccgcatcgaaggcttc
aggctcacaaacgagcacgcgatcagatcggtaaaggaatggagacggatcgacaatgcc
aatgtcgttactatacacgacgccttcactgccagagcctttggcgacagctccctcata
tttgtgcaggattatcaccccttagccaagtcgctagcagagcatcatctgaccgcaaat
cctgttcacggacagcgattccagccaaagtcacccatctccgaagccgtactatggggc
tacatttcacagattgccaatgcactcaaagctatccattcgagcaatctggctgccagg
tgcatcgacgtcagcaagattctggtgacgggcaaaaacagaattcgtctgaacgcctgc
tccattctcgacgttgtgcagtttgaaaaccgccgcccgctccccgaattacaacaagac
gattttgtgcaatttggccgcaccatgctctgcttggctactggaactctaccagcgcac
cttaataatatcacatcatctttggagcagatgagcagaacatattcggcagaacttcgc
gacaccatcatttggcttttcacgcctgctcaaacaccggcgcaaaagaccattgatgag
ttcatccgaggcgttgcgggccatattgtcacctcgctagaccagagccaacaccaggcg
gacgagctcaacacggagctgtaccgagagctcgaaaatggccgtattgcgcgcctcttg
atgaagctcggcgctgtgaatgagcgacaggagtttgacggcgaccgggcatggtctgaa
aacggcgagcgctacatgctaaagctcttccgtgatcacgtattccaccaggtggatagt
aacaacaatccagtgctggacgtgggtcacatgctgcgcaacctcaacaagctggatgcg
ggcacggacgaaaagatttgtctgacaagccgggatgagcagacgagtttcattgtcagc
tacaaggagctgaagaagcagctagcaagcgcctttaacgacttgcaaaaggggagcaag
caagcaaggggcatctag
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