Akanthomyces muscarius: LMH87_002789
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Entry
LMH87_002789 CDS
T09501
Name
(RefSeq) hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
amus
Akanthomyces muscarius
Pathway
amus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMH87_002789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amus03019
]
LMH87_002789
Messenger RNA biogenesis [BR:
amus03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
LMH87_002789
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
LMH87_002789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
80889948
NCBI-ProteinID:
XP_056051253
UniProt:
A0A9W8UJL8
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All DBs
Position
3:4252380..4253365
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AA seq
305 aa
AA seq
DB search
MIRRSRDRSFYLLLPAEGFLQKDARGGMPVEFYTGLLACLAKHGAYSRRSPMPHFGGGRF
LPSQLAELFQAAVRTGLQTRPYETSQRSNRYYTAITIMATAEVPSLAIPGSVLGPATKYA
PGAGTHIFEGNVVASLMGNVTVTPPAKTPGPAKRLNKITAPTSEELYTITVARLGRKREI
LPDVNNIVLARVVRLMPKQAIVVIQQVGDTVLQTEWQGVIRVQDVRATEKDKVKIYESFK
PGDIVRAQVISLGDQANYYLSTASNELGVIMATSEAGNDMVPVSWKDFKDPETGASELRK
VAKPS
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatccgaaggagccgggacagatctttttatttgcttctacccgctgaagggttctta
cagaaagatgcgaggggcggaatgccggtggagttttacacaggcctgcttgcctgctta
gcaaagcacggagcttacagtcgccgctcaccgatgccccattttggcggtggacgtttt
ttgccgtcgcagctggcagagctttttcaggcagctgtccgaaccggcctgcaaacacga
ccgtacgaaacgtctcagcgcagcaatcgttattacaccgccatcaccatcatggctact
gcagaggtaccgagccttgcgattccaggcagcgtgcttggtcccgcaaccaaatacgcg
cccggcgcgggaacgcacatctttgaaggcaacgtggtggcgtcgttgatgggcaatgtg
acggtcacgcctccagccaagacgcccggccccgcgaaacgattgaacaaaatcacggcg
cctacatccgaagaattatatacgattactgttgcgcgcctcggccgcaagcgcgagatc
cttcccgacgtcaacaacattgtgctggctcgtgtggtgcgcttgatgcccaagcaagcc
attgtcgtgatccagcaggtcggtgacactgtgctgcagacggaatggcagggcgtgatt
cgcgtgcaggatgtgcgcgccacggaaaaggacaaggtgaaaatatacgaatcattcaag
cctggcgatattgtgcgggctcaggtgatttcgctgggagaccaagccaattattacctg
tcgacggcatcgaacgagctcggcgtcatcatggcgaccagcgaggccggtaacgacatg
gtgccagtcagctggaaggacttcaaggatcccgagacaggcgcaagcgagctgcgcaag
gttgccaagccgagctga
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