KEGG   Akanthomyces muscarius: LMH87_002789
Entry
LMH87_002789      CDS       T09501                                 
Name
(RefSeq) hypothetical protein
  KO
K07573  exosome complex component CSL4
Organism
amus  Akanthomyces muscarius
Pathway
amus03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:amus00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LMH87_002789
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amus03019]
    LMH87_002789
Messenger RNA biogenesis [BR:amus03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     LMH87_002789
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     LMH87_002789
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1
Other DBs
NCBI-GeneID: 80889948
NCBI-ProteinID: XP_056051253
UniProt: A0A9W8UJL8
LinkDB
Position
3:4252380..4253365
AA seq 305 aa
MIRRSRDRSFYLLLPAEGFLQKDARGGMPVEFYTGLLACLAKHGAYSRRSPMPHFGGGRF
LPSQLAELFQAAVRTGLQTRPYETSQRSNRYYTAITIMATAEVPSLAIPGSVLGPATKYA
PGAGTHIFEGNVVASLMGNVTVTPPAKTPGPAKRLNKITAPTSEELYTITVARLGRKREI
LPDVNNIVLARVVRLMPKQAIVVIQQVGDTVLQTEWQGVIRVQDVRATEKDKVKIYESFK
PGDIVRAQVISLGDQANYYLSTASNELGVIMATSEAGNDMVPVSWKDFKDPETGASELRK
VAKPS
NT seq 918 nt   +upstreamnt  +downstreamnt
atgatccgaaggagccgggacagatctttttatttgcttctacccgctgaagggttctta
cagaaagatgcgaggggcggaatgccggtggagttttacacaggcctgcttgcctgctta
gcaaagcacggagcttacagtcgccgctcaccgatgccccattttggcggtggacgtttt
ttgccgtcgcagctggcagagctttttcaggcagctgtccgaaccggcctgcaaacacga
ccgtacgaaacgtctcagcgcagcaatcgttattacaccgccatcaccatcatggctact
gcagaggtaccgagccttgcgattccaggcagcgtgcttggtcccgcaaccaaatacgcg
cccggcgcgggaacgcacatctttgaaggcaacgtggtggcgtcgttgatgggcaatgtg
acggtcacgcctccagccaagacgcccggccccgcgaaacgattgaacaaaatcacggcg
cctacatccgaagaattatatacgattactgttgcgcgcctcggccgcaagcgcgagatc
cttcccgacgtcaacaacattgtgctggctcgtgtggtgcgcttgatgcccaagcaagcc
attgtcgtgatccagcaggtcggtgacactgtgctgcagacggaatggcagggcgtgatt
cgcgtgcaggatgtgcgcgccacggaaaaggacaaggtgaaaatatacgaatcattcaag
cctggcgatattgtgcgggctcaggtgatttcgctgggagaccaagccaattattacctg
tcgacggcatcgaacgagctcggcgtcatcatggcgaccagcgaggccggtaacgacatg
gtgccagtcagctggaaggacttcaaggatcccgagacaggcgcaagcgagctgcgcaag
gttgccaagccgagctga

DBGET integrated database retrieval system