Akanthomyces muscarius: LMH87_002963
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Entry
LMH87_002963 CDS
T09501
Name
(RefSeq) hypothetical protein
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
amus
Akanthomyces muscarius
Pathway
amus03013
Nucleocytoplasmic transport
amus03015
mRNA surveillance pathway
amus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LMH87_002963
09122 Translation
03013 Nucleocytoplasmic transport
LMH87_002963
03015 mRNA surveillance pathway
LMH87_002963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amus03019
]
LMH87_002963
03041 Spliceosome [BR:
amus03041
]
LMH87_002963
03009 Ribosome biogenesis [BR:
amus03009
]
LMH87_002963
03012 Translation factors [BR:
amus03012
]
LMH87_002963
Enzymes [BR:
amus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LMH87_002963
Messenger RNA biogenesis [BR:
amus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
LMH87_002963
mRNA cycle factors
Stress granule specific factors
LMH87_002963
Spliceosome [BR:
amus03041
]
Complex C
Other components
EJC/TREX
LMH87_002963
Ribosome biogenesis [BR:
amus03009
]
Eukaryotic type
90S particles
Helicases
LMH87_002963
Translation factors [BR:
amus03012
]
Eukaryotic type
Initiation factors
eIF-4
LMH87_002963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
TniB
Flavi_DEAD
COG4_N
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
80890122
NCBI-ProteinID:
XP_056051438
UniProt:
A0A9W8Q845
LinkDB
All DBs
Position
3:complement(4698590..4699897)
Genome browser
AA seq
401 aa
AA seq
DB search
MADVGIDRNADEKMEFSTSKEVTVHPTFESMSLKENLLRGIYAYGYESPSAVQSRAIVQV
CKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRESQALVLSPTRELATQIQSVVMALGDY
MNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADEL
LNKGFREQIYDVYRHLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLK
QYFIAVEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMP
QKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFG
RKGVAINFVTTDDVRILRDIELYYSTQIDEMPMNVADLIGA
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgttggaattgatcgcaatgcggatgagaagatggagttctcgacctccaag
gaggtcacggtccatcccactttcgagtccatgtcgctgaaggaaaatcttcttcgcggc
atctatgcctacggttacgaatcgccttctgccgttcaatcgcgagccatcgtccaggtt
tgcaagggacgcgacacaattgcccaggcccagtctggtacgggtaaaactgccactttc
tctatcagtatgctacaggttatcgacaccgccgttcgcgagtcgcaggcccttgtactg
tcgcccacgagagaacttgcgacacagatccagtccgttgtcatggctttgggtgactac
atgaacgtccagtgtcatgcctgtattggcggcaccaacgttggggaggatattcgcaag
ctcgactacggccagcacattgtttctggcacccctggccgggtcgctgatatgattcgc
agacgccacctgcgcacgcgccacatcaagatgctggtactcgatgaagctgatgaactt
cttaacaaggggttcagagagcaaatctacgacgtataccgccatcttcctcccgctact
caggtcgttgttgtcagcgctacgctgccttacgacgtactggacatgaccaccaagttt
atgaccgaccccgtccgaatcctggtcaagcgtgatgagttgactctggagggcctgaag
cagtactttattgctgtggaaaaggaggactggaagttcgatacactgtgtgatctttac
gatacacttaccattacacaggccgtcatcttctgcaacactcgtcgcaaggttgactgg
ctgacggacaagatgcgcgaggccaacttcacagtcagcagcatgcacggtgaaatgccc
cagaaagagcgtgacagcattatgcaggatttccgtcagggcaacagccgtgttctgatt
tctaccgatgtctgggctcgtggtattgatgtccaacaagttagcttggtcatcaactac
gatttgcctagcaatcgtgaaaactacatccatcgtattggtcgtagtggtcgtttcggt
cgcaagggtgtcgccatcaactttgttaccacggatgatgtccgcattcttcgcgatatc
gagttgtactactcgacacagattgacgagatgccaatgaatgttgctgatctcattgga
gcttaa
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