Akanthomyces muscarius: LMH87_004252
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Entry
LMH87_004252 CDS
T09501
Name
(RefSeq) hypothetical protein
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
amus
Akanthomyces muscarius
Pathway
amus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
amus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
LMH87_004252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amus03019
]
LMH87_004252
Messenger RNA biogenesis [BR:
amus03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
LMH87_004252
U7-dependent histone pre-mRNA processing factors
LMH87_004252
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
FDF
Stevor
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
80891411
NCBI-ProteinID:
XP_056049070
UniProt:
A0A9W8Q3E2
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Position
2:complement(3371909..3374920)
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AA seq
983 aa
AA seq
DB search
MFTFCSLQGAQSESLASQSLLELDGGVKVLVDLGWDESFDVAKLEELEKQVPTLSLILLT
HATASHLAAYAHCCKNIPLFTRIPVYATRPVIDLGRTLTQDLYSSTPAAATTIPPSALSA
SVYAYAQTTAAAHNLLLQSPNTEEIARYFSLIQPLKYSQPHQPLPSPFSPPLNGLTITAY
NSGHTLGGTIWHIQHGLESIVYAVDWNQARENVFAGAAWLGGAGGGGAQVIEQLRKPTAL
ICSSRGAERNAQAGGRTKRDEQLLETIKAAVVKGGTVLIPVDSSARVLELAYLLEHAWRT
DSTSVNGVLKAAKLYLAGRNMASTMRYARSMLEWMDDSIVQEFEAFAEGQKKTNGASDRK
VGGPFDFRFMRLLDRKAQIAKLLSTVVHHDESHGRVILASDTSMDWGFSKDLLRGLASDP
NNVVVLTDKPGLAQESGPSIARTLWSLWKERKDGVATEQTTTGDVIEYVNTGGYDLEIRD
AKREPLEGEELTAYQQWLATQRQLQATQQTVGADGMEASADVVDDVSSESSSDSEDEDGQ
QQGKALNVSAALGQAGRKNVVLKDEDLGISILIKKKGVYDFDSRGKRGRERSFPIAVRRK
RNDDFGELIRPEDYLRAEEKEDDAVDGPNAAADDENLGKKRKWDDVQGAGANKKPQLGRG
VAGGAFAGDGGEDGNMTGMQDGFEPDELDAAEDVQTDEPDGPCKLIYTTETVAVNLRIAY
VDFAGLHDKRSLNMLIPLIQPRKLILTAGTREETLALAQDCRAILGADAAGGGEKGAGSS
ADVYTPEIGAIVDASVDTSAWVVKLADSLVKKLKWQNVRGLGIVTVSGQLFAAAAAAAAA
AAGSGTTNEDAEDEDAANKRQKTSDSLALTTTHSAVVAAAPGVMPTLDVVTASLAAVART
AAPPLHVGDLRLADLRRAMQGAGHAAEFRGEGMLVVDGAVVVRKTAEGQVEVESVGLPVA
GRRSTLHEVKRAIYDNLAVVAGA
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgttcacgttttgctccctccagggtgcgcagtccgagtcgctggcatcgcagtccctg
ctggagctcgatggtggcgtcaaggtgctcgtagacctcgggtgggacgaatcattcgac
gtggccaagctcgaggagctggaaaaacaagtcccgaccctctccctcatcctgctgacg
catgcgaccgcctcccacctcgccgcctacgcacactgctgcaagaacatccccctcttc
acgcgcatccccgtctacgcgactcgacccgtcatcgacctcggccgtaccctcacgcag
gacctctactcgtcgacccccgctgcggccacaacaatcccgccgtctgcgctctccgcg
tccgtttatgcctacgcgcaaacgacagcggcagcgcacaacctgctcctgcagtccccg
aacactgaagagattgcgcgctacttctccctcatccagccgctcaagtattcgcagccg
caccaaccgctgccgtcgcccttttcgccgccgctcaacggtctcacaatcaccgcctac
aactcgggccacacgctcggcggtaccatctggcacatccagcacgggctcgagtccatc
gtctacgccgtcgactggaaccaggcgagggagaatgtctttgcgggcgcggcctggctg
ggcggcgccggcggcggtggcgcgcaggtcattgagcagctgcgcaagccgacggcactg
atctgcagcagtcgcggtgcggagaggaatgcgcaggccggcggtcgcaccaagcgcgac
gagcagctgctcgaaacgatcaaggcggcggtcgtcaagggcggcaccgtcttgatcccg
gtagactcgagtgcgcgcgtgctcgagctggcatatctactagaacacgcatggcggaca
gattccacatcggtaaatggcgttttaaaagctgcaaagctctacttggcaggtcgaaat
atggcgagtaccatgcgctacgcacggagtatgctagagtggatggatgacagcatcgta
caagagttcgaggcctttgcggaaggccagaagaagacgaatggagccagcgacaggaag
gttggtggtccgtttgattttagatttatgcgtctgctggatcgcaaagcacaaatcgca
aagcttctctcgacggttgtgcatcatgacgagtcgcatgggcgtgtgattctagcgagc
gatactagcatggattggggattctctaaagatctgctccgaggcctggcgtcggatccg
aacaatgttgtggtcctcaccgataagcctggcctggcgcaagaaagcggcccatccata
gccagaacgctatggagcctgtggaaagagcgcaaggacggagttgctacagaacaaacg
acaacaggcgacgttatcgagtacgtcaacacaggcggctatgacttggagattcgcgat
gccaagcgtgagcccctagaaggcgaggagttgaccgcatatcaacaatggcttgccaca
caacggcagctccaggctacacagcagaccgtcggcgccgacggcatggaggcatctgcc
gacgtcgtcgacgatgtatcctcagaatcctcgtcagactcggaagacgaggacggccag
caacaaggcaaggcactgaatgtgtccgctgctcttggccaagcgggccgcaagaacgtg
gttctcaaagacgaggatctcggtattagcatattaatcaagaagaagggagtctacgat
ttcgactcacgcgggaaacgcggccgtgaacgatctttccccattgcggtgcgcagaaag
agaaacgacgactttggcgagctgattcggccagaagactatctccgcgccgaagagaaa
gaagacgacgccgtcgacggcccgaatgccgctgccgatgatgaaaacctgggcaagaag
cgcaagtgggacgatgtccaaggcgccggcgccaacaagaagccgcagcttggcagaggc
gtcgccggtggcgcgtttgcaggcgacggcggcgaggacggcaacatgacgggcatgcag
gatggctttgagccggacgaactggatgccgccgaggatgtccagaccgacgagccggac
ggcccttgcaagctgatttacaccacagaaaccgtcgccgtcaacctgcgcatcgcctac
gtcgactttgccggcctgcacgacaagcgcagtctcaacatgctgattccgctcatccag
ccgcgcaagctcatcctcactgcgggcacgcgcgaggagacgttggcgctggcgcaggac
tgccgcgccatcctcggtgccgatgctgctgggggcggcgaaaagggcgccggcagcagt
gccgacgtctacacacccgaaatcggcgccatcgtggacgccagcgtcgacacgagcgcc
tgggtcgtcaagctggccgactcgctcgtcaagaagctcaagtggcaaaacgtgcgcggc
ctgggcatcgtcaccgtctctgggcagctcttcgccgccgccgccgccgctgctgccgcc
gccgccggcagtggaaccacaaacgaagacgccgaagacgaagacgcggccaacaagcgc
caaaagacgagcgactccctggcgctcacgacgacgcactcggccgtggtcgccgcggcg
ccgggcgtcatgccgacgctcgacgtggtgacggccagcctcgcggcggtggcgcgcacg
gccgcgccgccgctgcacgtgggcgacctgcgcctcgcggacctgcggcgcgcgatgcag
ggcgcgggccacgcggccgagtttcgcggcgagggcatgctcgtcgtcgacggcgccgtc
gtcgtgcgcaagacggccgagggccaggtcgaggtggagagcgtgggcctgccggtcgca
ggccggaggagcacgctgcacgaggtcaagagggccatttacgacaacttggccgtggtg
gccggcgcatga
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