KEGG   Akanthomyces muscarius: LMH87_004252
Entry
LMH87_004252      CDS       T09501                                 
Name
(RefSeq) hypothetical protein
  KO
K14402  cleavage and polyadenylation specificity factor subunit 2
Organism
amus  Akanthomyces muscarius
Pathway
amus03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:amus00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    LMH87_004252
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amus03019]
    LMH87_004252
Messenger RNA biogenesis [BR:amus03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     LMH87_004252
    U7-dependent histone pre-mRNA processing factors
     LMH87_004252
SSDB
Motif
Pfam: Lactamase_B_6 CPSF100_C Beta-Casp RMMBL FDF Stevor Ribosomal_60s
Other DBs
NCBI-GeneID: 80891411
NCBI-ProteinID: XP_056049070
UniProt: A0A9W8Q3E2
LinkDB
Position
2:complement(3371909..3374920)
AA seq 983 aa
MFTFCSLQGAQSESLASQSLLELDGGVKVLVDLGWDESFDVAKLEELEKQVPTLSLILLT
HATASHLAAYAHCCKNIPLFTRIPVYATRPVIDLGRTLTQDLYSSTPAAATTIPPSALSA
SVYAYAQTTAAAHNLLLQSPNTEEIARYFSLIQPLKYSQPHQPLPSPFSPPLNGLTITAY
NSGHTLGGTIWHIQHGLESIVYAVDWNQARENVFAGAAWLGGAGGGGAQVIEQLRKPTAL
ICSSRGAERNAQAGGRTKRDEQLLETIKAAVVKGGTVLIPVDSSARVLELAYLLEHAWRT
DSTSVNGVLKAAKLYLAGRNMASTMRYARSMLEWMDDSIVQEFEAFAEGQKKTNGASDRK
VGGPFDFRFMRLLDRKAQIAKLLSTVVHHDESHGRVILASDTSMDWGFSKDLLRGLASDP
NNVVVLTDKPGLAQESGPSIARTLWSLWKERKDGVATEQTTTGDVIEYVNTGGYDLEIRD
AKREPLEGEELTAYQQWLATQRQLQATQQTVGADGMEASADVVDDVSSESSSDSEDEDGQ
QQGKALNVSAALGQAGRKNVVLKDEDLGISILIKKKGVYDFDSRGKRGRERSFPIAVRRK
RNDDFGELIRPEDYLRAEEKEDDAVDGPNAAADDENLGKKRKWDDVQGAGANKKPQLGRG
VAGGAFAGDGGEDGNMTGMQDGFEPDELDAAEDVQTDEPDGPCKLIYTTETVAVNLRIAY
VDFAGLHDKRSLNMLIPLIQPRKLILTAGTREETLALAQDCRAILGADAAGGGEKGAGSS
ADVYTPEIGAIVDASVDTSAWVVKLADSLVKKLKWQNVRGLGIVTVSGQLFAAAAAAAAA
AAGSGTTNEDAEDEDAANKRQKTSDSLALTTTHSAVVAAAPGVMPTLDVVTASLAAVART
AAPPLHVGDLRLADLRRAMQGAGHAAEFRGEGMLVVDGAVVVRKTAEGQVEVESVGLPVA
GRRSTLHEVKRAIYDNLAVVAGA
NT seq 2952 nt   +upstreamnt  +downstreamnt
atgttcacgttttgctccctccagggtgcgcagtccgagtcgctggcatcgcagtccctg
ctggagctcgatggtggcgtcaaggtgctcgtagacctcgggtgggacgaatcattcgac
gtggccaagctcgaggagctggaaaaacaagtcccgaccctctccctcatcctgctgacg
catgcgaccgcctcccacctcgccgcctacgcacactgctgcaagaacatccccctcttc
acgcgcatccccgtctacgcgactcgacccgtcatcgacctcggccgtaccctcacgcag
gacctctactcgtcgacccccgctgcggccacaacaatcccgccgtctgcgctctccgcg
tccgtttatgcctacgcgcaaacgacagcggcagcgcacaacctgctcctgcagtccccg
aacactgaagagattgcgcgctacttctccctcatccagccgctcaagtattcgcagccg
caccaaccgctgccgtcgcccttttcgccgccgctcaacggtctcacaatcaccgcctac
aactcgggccacacgctcggcggtaccatctggcacatccagcacgggctcgagtccatc
gtctacgccgtcgactggaaccaggcgagggagaatgtctttgcgggcgcggcctggctg
ggcggcgccggcggcggtggcgcgcaggtcattgagcagctgcgcaagccgacggcactg
atctgcagcagtcgcggtgcggagaggaatgcgcaggccggcggtcgcaccaagcgcgac
gagcagctgctcgaaacgatcaaggcggcggtcgtcaagggcggcaccgtcttgatcccg
gtagactcgagtgcgcgcgtgctcgagctggcatatctactagaacacgcatggcggaca
gattccacatcggtaaatggcgttttaaaagctgcaaagctctacttggcaggtcgaaat
atggcgagtaccatgcgctacgcacggagtatgctagagtggatggatgacagcatcgta
caagagttcgaggcctttgcggaaggccagaagaagacgaatggagccagcgacaggaag
gttggtggtccgtttgattttagatttatgcgtctgctggatcgcaaagcacaaatcgca
aagcttctctcgacggttgtgcatcatgacgagtcgcatgggcgtgtgattctagcgagc
gatactagcatggattggggattctctaaagatctgctccgaggcctggcgtcggatccg
aacaatgttgtggtcctcaccgataagcctggcctggcgcaagaaagcggcccatccata
gccagaacgctatggagcctgtggaaagagcgcaaggacggagttgctacagaacaaacg
acaacaggcgacgttatcgagtacgtcaacacaggcggctatgacttggagattcgcgat
gccaagcgtgagcccctagaaggcgaggagttgaccgcatatcaacaatggcttgccaca
caacggcagctccaggctacacagcagaccgtcggcgccgacggcatggaggcatctgcc
gacgtcgtcgacgatgtatcctcagaatcctcgtcagactcggaagacgaggacggccag
caacaaggcaaggcactgaatgtgtccgctgctcttggccaagcgggccgcaagaacgtg
gttctcaaagacgaggatctcggtattagcatattaatcaagaagaagggagtctacgat
ttcgactcacgcgggaaacgcggccgtgaacgatctttccccattgcggtgcgcagaaag
agaaacgacgactttggcgagctgattcggccagaagactatctccgcgccgaagagaaa
gaagacgacgccgtcgacggcccgaatgccgctgccgatgatgaaaacctgggcaagaag
cgcaagtgggacgatgtccaaggcgccggcgccaacaagaagccgcagcttggcagaggc
gtcgccggtggcgcgtttgcaggcgacggcggcgaggacggcaacatgacgggcatgcag
gatggctttgagccggacgaactggatgccgccgaggatgtccagaccgacgagccggac
ggcccttgcaagctgatttacaccacagaaaccgtcgccgtcaacctgcgcatcgcctac
gtcgactttgccggcctgcacgacaagcgcagtctcaacatgctgattccgctcatccag
ccgcgcaagctcatcctcactgcgggcacgcgcgaggagacgttggcgctggcgcaggac
tgccgcgccatcctcggtgccgatgctgctgggggcggcgaaaagggcgccggcagcagt
gccgacgtctacacacccgaaatcggcgccatcgtggacgccagcgtcgacacgagcgcc
tgggtcgtcaagctggccgactcgctcgtcaagaagctcaagtggcaaaacgtgcgcggc
ctgggcatcgtcaccgtctctgggcagctcttcgccgccgccgccgccgctgctgccgcc
gccgccggcagtggaaccacaaacgaagacgccgaagacgaagacgcggccaacaagcgc
caaaagacgagcgactccctggcgctcacgacgacgcactcggccgtggtcgccgcggcg
ccgggcgtcatgccgacgctcgacgtggtgacggccagcctcgcggcggtggcgcgcacg
gccgcgccgccgctgcacgtgggcgacctgcgcctcgcggacctgcggcgcgcgatgcag
ggcgcgggccacgcggccgagtttcgcggcgagggcatgctcgtcgtcgacggcgccgtc
gtcgtgcgcaagacggccgagggccaggtcgaggtggagagcgtgggcctgccggtcgca
ggccggaggagcacgctgcacgaggtcaagagggccatttacgacaacttggccgtggtg
gccggcgcatga

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