Akanthomyces muscarius: LMH87_005206
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Entry
LMH87_005206 CDS
T09501
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
amus
Akanthomyces muscarius
Pathway
amus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LMH87_005206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amus03041
]
LMH87_005206
Spliceosome [BR:
amus03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
LMH87_005206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_Gbeta
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
PRP4
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_RIG_1st
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_WDR19_1st
Tricorn_2nd
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
WD40_like
Motif
Other DBs
NCBI-GeneID:
80892365
NCBI-ProteinID:
XP_056058397
UniProt:
A0A9W8QND0
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Position
1:885634..887187
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AA seq
517 aa
AA seq
DB search
MMHPSRQARVDDEPMSGIALEDLPEDHDYNLPTNVAGATSEKASAILSQLNRKRLAATIA
VPTDDGRVRAKLREMGEPVTLFGEGPGDRRDRLRELMTIQVEQAGGDAADVTMEDAEEDE
DEADEEFYSRGGQALLEARINIAKYSLPRAKQRTAFQRLESKIPLRTQVKFRKQMKERLS
GFELQGSQIVGERHISMTRISPNSELIAVGNWGGQVKLLGLQNLDEKMTYRGHTNKISGI
SWLPGATLPESNVSSGSVNFASGGAEGLVNLWSLDQDTPLATLQGHSQRVCRVEFHPSGR
YLASASEDTSWRLWDVETSKELLLQEGHSRGVYAVSFNNDGSLIASAGLDSIGRIWDVRS
GRTVMILDGHKDGHIKPIYALDWSADGHRVLTGSADGWIKCWDVRKVQRTGGVGAHSSAI
SDVRWFKGLDDPLDGIAPPVDDQGVQTPKKTGTFVVSAGFDRNVKIFSADDWSLIQTLSG
HTGPVTSADYSRDGKWIVSGGHDRTVKLWGRNDGEAA
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacccgtcgaggcaagcgcgcgtcgatgacgagcccatgtcgggcattgcgctc
gaagatctccccgaggatcacgactacaacctgcctacaaatgtcgctggtgccacgtct
gaaaaggcgtcggccatcctcagccagctcaatcgcaaacgcctcgcagctacgatagct
gtccctaccgacgatggacgtgtacgagcgaagcttcgtgagatgggcgagcccgttacg
cttttcggagaaggcccgggcgaccgacgagacagactgcgcgagctcatgaccattcag
gtcgagcaggcaggcggcgacgctgccgacgtcacaatggaggacgccgaagaggacgag
gacgaggcggatgaggagttttactcgcgcggcggccaagcgctcctcgaggcgcgcatc
aacattgccaaatactctctgccgagggccaagcaacggacagcctttcagcgtctcgag
tccaagattcccctgcgcacgcaggtcaagttccgcaagcagatgaaggaacggctgtct
gggtttgaactccaaggcagtcagattgttggtgaacgccatatcagtatgacgaggata
tcacctaacagcgagctcatcgctgtcggaaactggggtggacaggtcaagctccttgga
ctacaaaacctcgacgaaaagatgacatatcgaggacatacaaacaagattagtggcata
tcttggcttccaggcgccacgctaccagaatcaaatgtttcgtccggctcagtcaacttt
gcatcgggtggcgctgaaggcctggtcaacctatggtccctggaccaagacactccgctc
gccacgctgcaaggccactcacagcgcgtatgtcgcgtggaattccacccgtcggggaga
tatcttgcttcagcctcggaagatacttcgtggcgactctgggacgtcgaaacaagcaag
gagcttctgctgcaagagggccactcgaggggtgtctacgccgtcagcttcaacaacgac
ggatccttaatagccagcgctggccttgacagcatcggaagaatatgggatgtacgatct
ggaagaacagtcatgattctcgacggccacaaagatggccacatcaagcccatttatgcg
cttgactggagcgcagacggacaccgagtgctgactggatccgccgacggctggatcaag
tgttgggatgttcgcaaggtgcaaaggacaggaggcgttggtgcccacagcagcgccatt
tcagatgtacgatggtttaagggcttggatgacccgctggatggcattgcgccgccggtg
gacgaccagggcgtgcagacccccaagaagacgggcacctttgtggtctcggcgggcttt
gaccgcaatgtcaaaatcttttctgccgacgactggagtttgatccagaccctgagtggc
catacaggcccagtgacttctgccgactacagcagagacggtaaatggattgtaagcggc
ggccacgaccgtactgtgaagctgtggggacggaacgacggcgaggccgcatag
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