Akanthomyces muscarius: LMH87_006045 Help Entry LMH87_006045      CDS       T09501                                  Name (RefSeq) hypothetical protein   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism amus  Akanthomyces muscarius Pathway amus03020   RNA polymerase amus03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:amus00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     LMH87_006045   09124 Replication and repair    03420 Nucleotide excision repair     LMH87_006045  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:amus03021]     LMH87_006045    03400 DNA repair and recombination proteins [BR:amus03400]     LMH87_006045 Enzymes [BR:amus01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      LMH87_006045 Transcription machinery [BR:amus03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      LMH87_006045 DNA repair and recombination proteins [BR:amus03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       LMH87_006045 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_7 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RNA_pol_Rpb1_R UNC80_N Motif Other DBs NCBI-GeneID:  80893204 NCBI-ProteinID:  XP_056059283 LinkDB All DBs Position 1:3143034..3148375 Genome browser AA seq 1759 aa AA seqDB search MANLPFPHSSAPLKTVEEIQFGMLSPEEIKNMSVAHILYPETMEENKTTPRDGGLNDPLL GSIDRQFKCKTCAQPMSECPGHFGHIELAKPVYHPGFIKKVKKVLEIVCHNCSKVLADES DPEFVQAVNTRDPKLRFKRVWAVCKKKRKCENEDRQDKNKDEEFAPGAKSVVLEGHGGCG NMQPQVRQAALQLKAAFEVTSEEGPKRKETVNISAEMAHGILRRISERDLHNIGLNSDYA RPEWMIITVLPVPPPPVRPSISMDGTGTGMRNEDDLTYKLGDIIRANGNVKQAIREGSPQ HIARDFEELLQYHVATYMDNDIAGQPRALQKSGRPVKAIRARLKGKEGRLRGNLMGKRVD FSARTVITGDANLSLHEVGVPRSIARTLTYPETVTPYNIAKLHQLVENGPNEHPGAKYVI RSDGTRIDLRHHRRAAQISLEYGWKVERHLIDGDYIIFNRQPSLHKESMMGHRVKVMPYS TFRLNLSVTSPYNADFDGDEMNLHVPQTEETRAEIKELCLVPNNIVSPQKNGPLMGIVQD SLAGVYKLCRRDTFLDKEIVQNLMLWVPNWDGVIPQPAILKPRPRWTGKQIISMVIPAEI SLYSKEDKLDNPLKDAGMLIQSGELMYGLLKKKYVGAAAGGIIHLCYNELGPEGAMAFLN GVQQVVTYWLLNTGHSIGIGDTIPDKATIKKIQAHIDENKAEVARLTAQATANELEALPG MNVRATFENKVSMALNMARDQAGTSTQKSLKDSNNAVTMSESGSKGSSINISQMTALVGQ QIVEGKRIPFGFKYRTLPHFTKDDYSPEARGFVENSYLRGLTPSEFFFHAMAGREGLIDT AVKTAETGYIQRRLVKALEDLSARYDGTVRNSLGDIIQFLYGEDGLDAMCIEKQRLGTIK MSDAAFENQYRLDLANPPEWFRKDYEYGNELAGDKASMELLDMEWDALLVDRRLVRDINK SKMGEEMMQLPLNIGRIIESAKRVFNIRETDRSNLRPSDVINTVHNLLAGMKIVRGADPI SLEADYNATILFKALLRSRLAFKEIVYVHRLNKLAFDHVIGELQNRWDRAFVSPGEMVGV LAAQSIGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEILNLAKNIKTPGMAVYLDTTLGT QEQAKKLRSLVEYTNLRSVTAVTEIHYDPDVQSTTIPEDVDMIESYFMIPDDAQDTIHRQ SRWLLRITLDRQKLLDKEIKIDDVAACIKEHYAADLAIIFSDNNADEQVIRIRTISRDDG KDEERDTRIEDDVMLKRLEAHLLDTMTLRGVPGVERAFLTKGTRLVEDKDGSELALKDDP RCTQWYLDTSGSALREVLAVDGVDPRRTYSNDLYQITEVFGVEAVRSALVKELTNVLAFD GSYVNHRHIALLCDIMTYRGIISAVTRHGINRADTGALMRCSFEETVEILLEAAATGELD DCRGISENVMLGQLAPMGTGNFDVYLDPKMLETVISDNSRMGLMPGMPTKEGEGEGAATP YDSGSPMGDSGYLSMASPAAGNFSPIQGAGSETPTGFNTEYGGGFGANGSMSPYSRGAAS PFSTSPTSPFSSGMGGYSPSSPNTGYSPTSPMLDGGARYATSPSFSPSSPSFSPTSPMLR PTSPASPNYSPTSPSYSPTSPTSPRHYSPTSPAQFNSPTSPSYSPASPNYSPASPNLHGG GPTSPSYSPASPSWSPTSPDAYSPTSPSFGRSPGQQQSPTSPSYSPTSPQFSPRTPGPSG SGGGSGTGNQYSPSSPNNE NT seq 5280 nt NT seq  +upstreamnt  +downstreamnt atggcgaaccttccctttccgcattcgagcgcgccgctcaaaactgtcgaggagattcag ttcggcatgctgtccccagaggagatcaaaaacatgagtgtcgcgcacattctgtacccc gaaactatggaggagaacaagacaacaccacgcgatggcggtctcaacgatccccttctc ggctctattgaccgccagttcaagtgcaaaacttgcgctcaacccatgagcgagtgtccc ggccattttggccatatagaactggcgaaaccggtataccaccctggtttcatcaagaaa gtgaaaaaggttttggagattgtctgccacaattgcagcaaagtgttggccgatgaaagc gatcccgagtttgttcaagccgtcaacacccgcgatccgaaactccgattcaagcgcgtc tgggccgtgtgtaagaagaagcgcaagtgtgagaacgaggacaggcaagacaagaacaag gacgaagaatttgctccaggtgccaagagcgtcgttctcgaaggacacggcggatgcggc aacatgcagccgcaggtaagacaagccgcgttgcagctcaaggccgctttcgaggtcact tcggaagagggccccaagaggaaggagaccgtgaacattagcgccgaaatggcgcacggt attcttcgccgcatctctgaacgcgatttgcacaacattggtctcaactcggactatgcc cgtcctgagtggatgattattactgttctgcctgtcccaccccctcccgtgcgtcctagt atttccatggatggtactggtaccggcatgagaaacgaagacgatttgacctacaagctt ggcgacattattcgcgccaacggtaatgtcaagcaggccattcgcgaaggatcaccgcag cacattgcgcgtgatttcgaggagttgctgcagtaccatgttgccacctacatggataac gatattgctggccagccgcgggcccttcaaaagagcggtcgtcctgtcaaggcgattcgc gcccgtctgaagggtaaggagggtcgtctgcgaggtaacttgatgggtaagcgtgtcgac ttttcggcgcgtaccgtcatcaccggtgatgccaacttgtctctgcacgaagtcggtgtc ccacgcagcattgctcgcactctcacatatcccgagacagtcactccctacaacattgcc aaactgcatcaactcgtcgaaaacggaccaaatgagcaccctggtgccaaatacgtcatt cgctctgacggcaccagaattgatctaagacatcacagacgcgctgctcagatttccctg gagtatggatggaaggttgaacgccatctcatcgatggcgactacatcatcttcaaccgt cagccctctctgcacaaggaatccatgatgggtcatcgtgtcaaggtcatgccctactct accttccgactaaacctgtccgttacttctccttacaacgccgatttcgacggtgatgaa atgaacttgcacgtgccccagaccgaggaaactcgagctgaaatcaaggagctttgtctc gttcccaacaacattgtttcgcctcagaagaacggtccgctcatgggtattgtccaggac tccctggctggtgtctacaagctctgccgtcgtgacacattcctcgacaaggagattgtt cagaacctcatgctctgggttcctaactgggatggtgtgattccgcaaccggctattctc aagcccaggcctcgctggaccggtaaacagattatcagcatggtcatcccggctgagatc agtctatacagcaaggaagacaagttggacaatccgctgaaagacgccggcatgcttatc cagagtggtgagcttatgtatggcctcctcaagaagaagtacgtcggtgctgctgcaggc ggtatcatccacttgtgctacaacgaacttgggcccgaaggcgccatggctttcttgaac ggtgtccagcaggtcgtcacctactggcttctgaacacgggtcatagtatcggtatcggt gacactattcccgataaggccaccatcaagaagatccaagctcatatcgatgagaacaag gctgaagtcgctcgactgactgcccaggctacagccaacgagctggaggctttgcctggt atgaacgttcgcgccactttcgagaacaaggtctccatggccctcaacatggctcgtgac caggctggtacgtcaacacagaaaagtctgaaggattcaaacaacgccgtcaccatgtcg gaatctggatccaagggttcttccataaatatttcacagatgacggctctcgttggtcag cagatcgtcgaaggaaagcgtattccttttggcttcaagtaccgcacactgcctcacttc acaaaggacgattactcgcctgaagctcgtggcttcgttgagaactcgtaccttcgtggt ctgacgccttctgaattctttttccacgccatggctggtagagaaggtcttattgatact gcggtcaagactgctgagacgggttacattcagcgacgtctggtcaaggcgctcgaagat ctcagcgctcgctacgatggaactgtgcgcaactcactgggtgacattattcagttcttg tacggtgaagatggtctcgatgctatgtgcattgaaaaacagagacttggcaccatcaag atgtctgatgccgcctttgagaaccaataccgcctggatcttgccaaccctcccgagtgg ttccgcaaggactacgagtacggcaatgagctggccggcgacaaggcgtccatggaattg ctggacatggagtgggatgccttgcttgtcgacagacgccttgttcgcgacatcaacaag agcaagatgggcgaagagatgatgcagcttcctctcaacatcggccgtatcattgagagc gccaagcgcgtcttcaacattcgcgaaactgatcgcagcaaccttcgcccgtctgatgtc attaacactgtgcacaatttgctggccggcatgaagattgtgcgcggcgcggaccccatt tcgctagaggccgactacaatgccacaattctcttcaaggctctcctacgctctcgtctt gctttcaaggagattgtgtacgtacatcgcttgaacaagcttgcctttgaccacgttatc ggcgagctccagaaccgctgggaccgagcctttgtcagccccggtgaaatggtcggtgtt cttgctgctcagtctattggtgaacccgctactcaaatgacgctcaacaccttccatttt gctggtgtgtcctccaagaacgttactcttggtgtgccgcgtctcaaggaaattctcaac ttggccaagaacatcaagacaccaggcatggccgtttacttggacacgacgctgggaacc caggagcaggccaagaagctccgtagtttggttgaatacaccaacctgcgctccgtcaca gcggtcaccgaaatccactacgatcccgatgtgcagtccaccaccattccagaagatgtg gacatgattgagtcgtactttatgattcccgacgatgctcaggacactattcaccggcag tcacgctggctcctccgtatcactttggaccgccagaagcttttggacaaggaaatcaag attgacgatgtcgctgcctgtatcaaggagcactacgccgccgatttggccatcatcttc tctgacaacaacgccgatgaacaagtcattcgtatccgcaccatcagccgggatgatggc aaggatgaggagcgcgacactagaattgaggacgatgtcatgctcaagcgtctggaagct cacttgctcgataccatgactcttcgtggtgtccctggtgtcgagagggctttcttgacc aagggcactcgcctggttgaagataaagacggctctgaactggctctcaaggacgatccg agatgcacgcagtggtacctggataccagtggctcagcgctccgagaggtgcttgctgtc gatggcgttgatcctagaaggacctacagtaacgacctgtaccagattactgaggtcttt ggtgtcgaggctgtacgatctgcgctggtgaaggaactgaccaacgttttggcctttgac ggttcttacgtcaaccatcgtcacattgctctgctttgcgatatcatgacctaccgtggc atcatttcggctgttactcgtcacggtatcaaccgtgccgatactggtgcgctcatgcgt tgttcgtttgaagagactgtcgaaattctgctcgaggctgccgctaccggtgaacttgac gactgccgtggtatttctgaaaacgtcatgctcggtcagcttgcgccgatgggtactggc aactttgacgtgtacctggatccgaagatgttggagactgtcatctctgacaactctcgc atgggtctcatgcctggcatgcccaccaaggagggtgagggcgagggtgctgcgacccct tacgacagtggctcgccgatgggcgactctggctacctcagcatggcttcgcctgctgcc ggtaacttctcgcctatccagggtgctggctcggaaacacctactggattcaatacggag tatggtggtggcttcggtgccaatggctcgatgagcccgtactcgcgcggcgctgccagc ccattcagcacgtcgcccacatcgccgttcagctcgggcatgggaggctactcgccatca tcgcccaatactggctactctcctacgtcacccatgctggatggtggtgctcgctacgcc acgtctccgtcattcagcccgtcgtcgccgtcgttttcgccaacgtcgcccatgctgcga cccacgagcccggccagtcccaactacagtccgacgtcgcccagctactcgccgacatcg ccgacatcgccgcgacactactcacctacgtcgccggctcagttcaactcgccgacgtct cccagctactctccggccagtcccaactacagtcctgcatctcccaacctgcacggaggt ggccctacctcaccctcgtactcgcctgcgtcgccgtcgtggtcaccaacctcacccgac gcgtactcgcccacgagcccgagtttcggacgcagccccggccagcagcagtcgcccaca agcccaagttactctcccacgtcgcctcagttctctcctcgcacgcctggtccctcgggc tctggcggaggttctggaactggcaaccagtactcgcctagctcgccgaataatgagtga

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