KEGG   Akanthomyces muscarius: LMH87_007224
Entry
LMH87_007224      CDS       T09501                                 
Name
(RefSeq) hypothetical protein
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
amus  Akanthomyces muscarius
Pathway
amus03020  RNA polymerase
amus03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:amus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    LMH87_007224
  09124 Replication and repair
   03420 Nucleotide excision repair
    LMH87_007224
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:amus03021]
    LMH87_007224
   03400 DNA repair and recombination proteins [BR:amus03400]
    LMH87_007224
Transcription machinery [BR:amus03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     LMH87_007224
DNA repair and recombination proteins [BR:amus03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      LMH87_007224
SSDB
Motif
Pfam: RNA_pol_Rpb4 DUF6036 Spexin
Other DBs
NCBI-GeneID: 80894383
NCBI-ProteinID: XP_056060515
LinkDB
Position
1:6570232..6570809
AA seq 142 aa
MSNKMSRPKPPPPGNEEASATLNLGEFQNVDTLTLSEASLVLNALVAKRRNDRKNVNETE
MLNQTLSYLDHFARFTQKENVEAVERLLSAHKDLAKFERAQLGSLCCENADEAKTLIPSL
ADKIKDDDLEDLLQEISKLQNR
NT seq 429 nt   +upstreamnt  +downstreamnt
atgtccaacaaaatgtcacggcccaagccgccgcctcccggcaacgaggaggcatcggcg
acgctaaacctcggagagtttcaaaacgtcgacactctgacgctatcggaagcgtcgctg
gtcctgaacgcgctggtcgcgaagcgtcgcaacgaccggaagaatgtcaacgagactgag
atgctgaaccagacgctcagctacctcgaccactttgcgcgcttcacgcaaaaggaaaac
gtcgaggccgtcgagcgactgctcagcgcgcacaaggacctggccaagtttgagcgcgcc
cagctgggatctctatgttgcgagaatgccgacgaggccaagacgctgattccgtcgctc
gccgacaagatcaaggacgatgatctggaagacttgctccaggaaatctccaagctgcaa
aatcggtaa

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