Akanthomyces muscarius: LMH87_010208
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Entry
LMH87_010208 CDS
T09501
Name
(RefSeq) hypothetical protein
KO
K10754
replication factor C subunit 1
Organism
amus
Akanthomyces muscarius
Pathway
amus03030
DNA replication
amus03410
Base excision repair
amus03420
Nucleotide excision repair
amus03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMH87_010208
03410 Base excision repair
LMH87_010208
03420 Nucleotide excision repair
LMH87_010208
03430 Mismatch repair
LMH87_010208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amus03032
]
LMH87_010208
03400 DNA repair and recombination proteins [BR:
amus03400
]
LMH87_010208
DNA replication proteins [BR:
amus03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
LMH87_010208
DNA repair and recombination proteins [BR:
amus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
LMH87_010208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
nSTAND3
AAA_22
AAA_18
AAA_30
AAA_33
AAA_16
AAA_14
RuvB_N
AAA_28
NTPase_1
AAA_5
Motif
Other DBs
NCBI-GeneID:
80897367
NCBI-ProteinID:
XP_056054392
LinkDB
All DBs
Position
5:2710688..2713913
Genome browser
AA seq
1024 aa
AA seq
DB search
MPDIRSFFTPKGGAAVAAVKAEPASQKPDNKRRKVGRKVIEDSDDDEVVEKKPAAKSTPK
ASKKKAEDDGLEISTNDYFASNEAQTSTQATPKKPTTAASKADVPVRSSPRSKTTVAKTA
ALSSDKPAPKRTSRSSHQRKQDDDDAHMEDADEDGDDIFAADIKGRGKGDDDYAEDSDED
MLPQPSRAAAKEKQTQDTKPSRAAAASKKRKTPEQDSDEEEEEELPRKKPTASKPRAPRA
KKADVPEDAAIQDILDSVATVRPPTPPPKDPNTKFDWRKAAGGGNATVQPVGSADIPEGE
EECLSGLSFVFTGVLSTIGRDEGQALVKRYGGKVTGQPSSKTSFVVLGDDAGPSKLAKIK
SFGIRTIDENGLFDLIRKLPAHGGTGKGAQKAQEKKKADEEKIKQQIAEMEAEEKAKRAA
ETKAAKLAASVSGAARPPPPSNVPTQLLTSKYAPTQLNHICGNKGQVEKIQAWLRNWPKA
KKYNFQKRGADGLGGERAIIISGPPGIGKTTAAHLAARLEGYDVLESNASDARSKRLVEA
GVSDVMNNTSLLGFFAGDGKSVDTTKKKMVLIMDEVDGMSGGDRGGVGAMAKFCKKTEVP
LILICNERRLPKMKPFDHVAFDIRFNRPTVDQVRSRIMTICHREGLKLPPPVVDALIEGS
NKDIRQIINMISTAKLDQTSLNYDQGKAMTKAWEKHVVLKPWDICQKMLGGGLFAPASKA
TLNDKIELYFNDHEFSFLMIQENYLRCKPMALNGKGYNKREEKLKALELFDQAAQSISDG
DLVDRMIHGPQQQWSLMPTHAIFSTVRPASFIAGQLMGSNFTSYLGNLSKTGKLGRFIRE
IHSHMRLKSSGDHNEIRQQYMPVLWKQLIDKLQVEGPESVSEVIDLMDAYYLTREDFDAI
QELGVGPMDESNVKIESKAKAAFTRTYNAMSHPVPFMKASTNVVAPKKSAQDVPDLEEAI
EEEDDAEVIEAPAQDDDEIDFKKDKYIKKPKAKKATKKSKAKADDEDEDEKPKPKSKAKA
KAKK
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacattcgctcctttttcacccctaaaggtggcgcggccgtggcggccgtgaaa
gctgagccagccagccaaaagcccgacaacaaaaggagaaaagttggtcgtaaggtcatt
gaagatagcgatgatgacgaggtcgtcgagaagaaacctgccgcaaagtctacaccaaaa
gcgagcaagaagaaggccgaagatgatggtttagagatatcaacgaacgactacttcgca
tcgaatgaggcgcagacttccacgcaggctactcccaagaaacctaccactgcagcaagc
aaagccgatgtccctgtgagaagcagtccaagatcgaaaacgacagtggcaaagacagca
gcgctgtccagcgataaaccggcaccaaaacgtacctccagatcttcgcaccagcgcaaa
caggacgatgacgatgcacatatggaagacgccgacgaagatggcgatgacatattcgct
gccgacataaaaggtcgcggcaagggagacgacgactatgcagaggactctgatgaagac
atgcttcctcagccatcgcgcgcagctgccaaagagaaacagacgcaggacaccaagccg
agccgtgctgctgcagcgagcaaaaagcgaaaaaccccggagcaagactcggatgaagaa
gaagaggaagagcttccgcgaaagaaaccaacagcttcaaaacctcgcgcgcctcgtgcc
aagaaagccgacgtacccgaagacgctgcaatccaagacattcttgacagtgttgccact
gttcggcccccgacaccgccaccaaaggaccccaataccaagtttgattggcgcaaagct
gccggaggtggaaatgcgactgtccagcctgttggtagtgcggacattcccgaaggcgaa
gaagaatgcttgagcggtctctcttttgtattcaccggagtcttgagcacaattggtcgt
gacgaaggccaggcactcgtgaagcgttatggcggaaaagtgactggccagcccagcagc
aaaactagcttcgtcgtgctgggcgatgatgctggtccaagcaaactggccaaaattaaa
tcattcggcatcagaactattgatgaaaacggcttgttcgatctcatccgcaagcttcct
gcccatggaggaactggcaaaggagcgcagaaagctcaagagaagaagaaagctgacgag
gaaaagatcaagcaacaaattgccgaaatggaggccgaagagaaggccaagagagctgct
gagacaaaggccgccaaactcgcagccagcgtgtcgggtgcagctcgccctccgccgcct
tctaatgtccctacacagttacttacctcaaagtatgctcctactcaactcaatcacatc
tgcggcaacaaaggccaagtcgaaaaaatccaagcctggctgcgaaactggcccaaggcc
aagaaatacaacttccagaaacgcggtgctgatggtttgggcggtgagcgagcaatcatc
atttccggccctcctggtattggcaaaacgacagcggctcatttggctgctaggctggaa
ggctatgacgttctggaaagcaacgccagtgacgctcgtagcaagagactggttgaagca
ggcgtcagcgacgtcatgaataatacttcgctacttggcttttttgcaggggacggcaaa
agtgtggataccacgaagaagaagatggtcctcatcatggacgaggtggatggcatgtct
ggcggcgacagaggaggtgttggcgcaatggccaagttctgcaaaaagactgaagtcccc
ttgattctcatttgcaacgagcgacgtctgccaaaaatgaagcctttcgaccacgttgca
ttcgacatacgattcaacaggccgactgttgaccaagttagatcgcgcattatgaccatc
tgccaccgcgaaggcttgaaactgccaccgcctgttgtcgatgccttgatcgaaggcagc
aataaagacatcagacagattatcaacatgatttcgacagcgaagctggatcagacaagc
ttgaactacgaccagggcaaagccatgaccaaagcttgggaaaagcacgttgttctcaag
ccatgggatatctgccagaagatgttgggtggtggactctttgcaccagctagcaaggcc
acactaaacgacaaaattgagctatactttaatgatcatgagttcagcttcctcatgatc
caggagaactacctccgttgcaagccaatggcgctcaacggcaagggctataataagcga
gaagaaaagctcaaggcactggagctgtttgatcaggctgctcaaagcattagcgacggc
gacttggtggatagaatgatccatggcccgcagcagcaatggagtctgatgccgacgcac
gccatattcagtactgtccgtcctgcaagcttcatcgcaggtcagctcatgggctccaac
tttacctcgtatcttgggaacctcagcaagaccgggaagctcggaaggtttatccgcgaa
attcattcccacatgcgcctgaagagctccggcgatcacaacgaaattcgacagcaatac
atgccagtcctgtggaagcagctcatcgacaagcttcaggtcgaaggcccagagtccgtg
tcggaggttatcgatttgatggacgcatactatctgacacgtgaagactttgatgctatt
caggagcttggtgtagggccaatggatgaaagcaatgtcaagatcgagtccaaggccaag
gcggccttcacacgaacgtacaacgccatgagccatccggtaccgttcatgaaagctagc
acaaatgtggtagcgccgaagaagtcagctcaagacgtgccagatctggaagaagcaatc
gaggaagaagacgacgcggaggtgatagaagcacctgctcaggatgacgacgagatcgat
ttcaagaaagacaagtacatcaagaagcccaaggcaaagaaggcgaccaagaaatcaaaa
gcaaaggcggacgacgaagatgaagatgagaagccaaagccaaaatcgaaggccaaggcc
aaggctaagaaatag
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integrated database retrieval system
