Akanthomyces muscarius: LMH87_010477
Help
Entry
LMH87_010477 CDS
T09501
Name
(RefSeq) hypothetical protein
KO
K10570
DNA excision repair protein ERCC-8
Organism
amus
Akanthomyces muscarius
Pathway
amus03420
Nucleotide excision repair
amus04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
amus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
LMH87_010477
09124 Replication and repair
03420 Nucleotide excision repair
LMH87_010477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amus04121
]
LMH87_010477
03400 DNA repair and recombination proteins [BR:
amus03400
]
LMH87_010477
Ubiquitin system [BR:
amus04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
LMH87_010477
DNA repair and recombination proteins [BR:
amus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
LMH87_010477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
eIF2A
Motif
Other DBs
NCBI-GeneID:
80897636
NCBI-ProteinID:
XP_056054671
LinkDB
All DBs
Position
5:3445466..3446938
Genome browser
AA seq
490 aa
AA seq
DB search
MQTRLLARETGDLQPQEFARSLASDLIRTFAPAPQHRFNGEILASQGSTSSGPSSVVEER
AHNIRAHGAGVSALDVDKFDGRLMISGGADGSIKIWDLESAPSPHRLHTFKPALSIARST
QEARSSTNRGHSHGVTHLAFYPFDSGAFLSSSYDKTLKLWSTPRAALSAEFPLNATIYSH
ATSPIADHLLVACATQHSNVRLVDLKSGAAVQALVAHGGPVLSTVWSPQHEHILASGHAD
GKVRVWDIRRAGGVVAQLDQEDSLGVVHRFTLAAANGADWSRQPHFRASSQAHDEAVNGI
KWTDDGRYIVTSGLDRKIRVWDADTGANTLASFGSLIQNQHPKTANMLLSPSGLCSTGDV
LVWANDQEMLVLNMHDGNVITRLRTPGVTNPVGPRSAEIGRNRITTMAWRGAGGSGCRAL
GPVMGGAQSLGTIYSAHLDGHIRVWMMTIPGPDDVDDFEEVDKNEEVRARKRKAVDDAYK
SLMGKNITFT
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcagactcgtcttctcgcgcgtgagactggcgatctccagccccaggagtttgcccgc
agcctcgccagcgacctcatccgcacctttgcgcccgcaccccagcaccgcttcaatggc
gagattctagcctcgcaagggtcgacaagcagcggcccctcctccgttgtcgaagagagg
gcgcacaatatccgcgcgcatggcgccggtgtcagcgctcttgatgtcgacaagtttgac
gggcgcctcatgatctcaggtggtgctgacggatccatcaagatctgggacttggagagc
gcgccgagccctcacaggctgcacacgttcaagccggcactttcgattgcgcgctcgaca
caagaagcgcgtagcagcaccaacaggggccacagccacggcgtcacgcatctggcattc
taccccttcgactcgggtgcgttcctctccagctcgtacgacaagacgctgaagctgtgg
tcaacaccgcgcgcagccttgtccgccgaatttcccttgaatgctacgatttactcgcat
gcgacgagtcccatagcagatcatctgctcgtagcgtgtgctacgcagcactccaatgtg
cggctggtcgacctcaaatccggcgccgcggtgcaggcgcttgttgcacacggagggcct
gtcctcagcacggtctggagcccgcagcatgagcacatcctcgctagcgggcatgcggat
ggaaaagtgcgtgtgtgggacattcgccgcgcaggcggcgttgtcgctcaactcgaccaa
gaggattcgctcggcgttgtgcatcgcttcactctggcggcggcgaatggtgcagactgg
agccgtcaaccgcatttccgcgcgtcatctcaagctcacgatgaagcggtcaacggaatc
aaatggacagacgatggcagatacattgtcacatcaggcttggaccgcaagattcgggtt
tgggatgccgacacgggcgcaaatactctcgccagctttggatcactcatacagaatcag
caccccaaaacagcaaatatgctcctgtcgccatcaggtctctgcagcactggtgatgtc
ctcgtttgggccaacgaccaggagatgctggtgctcaacatgcacgacggtaacgtcata
acgcgacttcgtacccccggcgtcacgaaccctgttggtccgcgcagcgccgagattggc
agaaaccgaatcaccaccatggcgtggcggggcgctggtggaagcggctgtcgcgcactt
gggcccgtcatgggtggcgcccaatcgctaggtacaatctacagtgctcacttggacggg
catatacgtgtctggatgatgacgattccaggacctgacgatgttgacgattttgaagag
gtggacaaaaatgaagaggtccgcgcacgtaagcggaaggccgtggacgatgcatacaag
agcctcatgggaaagaatattacattcacatga
DBGET
integrated database retrieval system