Akanthomyces muscarius: LMH87_010559
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Entry
LMH87_010559 CDS
T09501
Name
(RefSeq) hypothetical protein
KO
K10610
DNA damage-binding protein 1
Organism
amus
Akanthomyces muscarius
Pathway
amus03420
Nucleotide excision repair
amus04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
amus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
LMH87_010559
09124 Replication and repair
03420 Nucleotide excision repair
LMH87_010559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amus04121
]
LMH87_010559
03400 DNA repair and recombination proteins [BR:
amus03400
]
LMH87_010559
Ubiquitin system [BR:
amus04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Adoptor protein
LMH87_010559
DNA repair and recombination proteins [BR:
amus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
LMH87_010559
TCR (transcription coupled repair) factors
Cul4-CSA complex
LMH87_010559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Motif
Other DBs
NCBI-GeneID:
80897718
NCBI-ProteinID:
XP_056054754
LinkDB
All DBs
Position
5:3668060..3671699
Genome browser
AA seq
1162 aa
AA seq
DB search
MAYVAPVHLPTSIRHAIRLQFSSPDHDDLIVAKANRLEIWRVTQEGMTCLHTKVVHGTIC
MLQRLRPKDAVTDLLFVGTERLQYFNVSWNPEKNEMELNYEAIHDIAEPYMRESQSQNKC
LVDPTAKYMVMHMWEGVLNVFRLPSRRGASDKLEQMDQIRLTELWMKDSAFIHSRTGHPR
IAFLYKTQLDQEEARVAVYRLTKDDKGSDVSKFDPHKDRELDQVIADPYASMLIPVPVAE
EKRYHVRKTEGTRAHLGGLLVVGETLLTYFDSLTYSSVSSALDEPKIYVAWAMYDETHYF
LADDYGRLDLMTLETYAEPTGVVVTGMTVESLRFPDSKDLTSRASNLVYMGDGMLFVASH
HGDSQLLQIDLASRTMYPIKLLSNNGPILDFAIMDMGNREGDNQQGNVFSSGQARIVAGC
GAYRDGSLRSIRSGVGLEDYGILDEIQNTKGLFTIKSHGSKKVDTLVASFVMETRVFRFD
ADGDIEEVYEFAGMNLEAETLVATNLPNGHLLQVTTSEAAVFDLENGMRISSWATESGGE
ITAASCNGKWVLLCVDGTILVSLNVDKDLAACTQRYQGTNDSSQSDQISCLHASPDLKDY
GVVGWWNSGKITIVDLLTLSAKHGETLQQTSDAASVPRDISLVQLHPRSASGPTLLVALE
DGTVVNFNVSVEDLALSGKKSVTLGSSPARLHILPEGDGTSSVFATTEHASLIYSSEGRI
VYSATTADDATYVVPFDSEAFPDSILLSTDKHVRLCHVDKERLTHVKSLPVFETVRRVAY
APGVKAFALGCVKKELVHNEEVITCSVKLVDEIIFQELGAPLQLNASSTLEMVESVIRAE
LPDHTGALVERFIVGTSFVTGEEVGEAGETRGRILVLGVDEERQLYTIVSHNLKGACRCL
SVIDEYIVAGLSKTVVVYSYTEETSTEGSLQKLAAYRPATFPLAIDVSGNMIGVADLMQS
LSLVEFTPPKHGEPAKLEEKARHFQSAWATSVCHLDDERWLEADAQGNIIVLARNSDAPT
EQDRGRLEITSEIHLGEQINKMRKLNVAPTDNAAVSPKAFLASIEGTLYLYGDIAPQYQD
LLITLQTNIEQHVKTAGGINFHAWRSFRNQTREADGPFRFVDGEMVERFLDLNEATQAEL
CKDLGPSVEDVRNLIEELRRMH
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggcttatgtggcgccagtgcatctgccgaccagcatccgccatgcgatccgactccaa
ttcagctccccggaccatgatgacttgattgtcgccaaagcgaatcgactcgagatatgg
cgcgtcacgcaagagggcatgacgtgtctgcacaccaaagtcgtgcatggcacgatatgc
atgctgcagcgcttgcgaccgaaagatgccgtcaccgatctcctcttcgtcggtaccgaa
cgactgcaatacttcaacgtctcctggaatccggaaaagaacgaaatggagctcaactat
gaggctattcacgacattgccgagccgtacatgcgcgaatcgcaaagtcagaacaagtgc
ctggtggatcccacggcgaaatacatggtgatgcacatgtgggagggcgtgctcaacgtg
ttccgcttgcctagtaggcgcggtgcatctgacaagctcgaacaaatggaccagatccgc
ctcacggagctgtggatgaaggacagcgcgttcatccatagtcgtacaggccatcctcgc
atcgcatttctctacaagacccagcttgaccaggaggaagctcgtgtcgccgtttacaga
ctgacaaaagacgacaaaggcagcgatgtgtcgaagttcgacccgcacaaggatcgagag
cttgatcaagtcatcgccgacccgtacgcatccatgttgattcctgtgccggtcgccgag
gaaaaacgataccatgtgcgaaagactgaaggcacgagggcacatttgggcggtctactg
gtcgtgggcgagaccttgttgacgtattttgatagcttgacatattcgagcgtgtcatct
gcgctcgacgaaccgaagatatacgtcgcatgggccatgtacgatgaaacccactatttc
ctcgccgacgactacggacgactagacttgatgactctggaaacctacgcagagccaacc
ggggttgttgttacgggcatgactgttgagtctctcaggtttccggactccaaggacttg
acctcccgggcatcaaatcttgtttacatgggcgacggcatgcttttcgtggcctcccac
cacggcgactctcagctcttgcagatcgatctcgcctctcgtaccatgtatccgataaag
cttctttccaacaacggaccgattttggattttgcaatcatggatatgggaaatagagaa
ggtgacaaccagcagggcaacgtattttcgtcggggcaagccagaattgtcgcgggctgc
ggtgcatacagggacgggtccttacgcagcatcagaagtggtgttgggctggaagattat
ggcattctggatgaaatccaaaacacaaaaggactgttcacaataaagtcgcacggctcc
aagaaggtcgacacgcttgttgcttctttcgtcatggagacccgcgtctttagattcgac
gcagatggtgatatcgaggaagtctatgaattcgctggcatgaatttagaagctgagaca
ttggtcgcgaccaacttgcctaatgggcacctgctccaagtcacaacatcagaggccgcg
gtctttgaccttgaaaatggcatgaggatatcgtcatgggcgacagaaagtggtggagaa
atcacagctgcctcatgcaacgggaaatgggtgctgctttgcgttgacggaaccatactt
gtgtcgttgaatgttgacaaagacttggcagcttgcacacagcgctaccaggggaccaat
gactcgagccagtctgaccaaatctcatgtttacatgcctcgccggatctgaaagactat
ggcgtcgttgggtggtggaactctggcaagattacaatcgtggatctcttgacactcagc
gccaagcatggtgaaacccttcagcagactagtgatgccgcttcagtacctcgcgacata
tcgctggtccagctccatccccgcagcgcatcaggccccacacttttggttgctttggaa
gacggaactgttgtcaactttaacgtctctgttgaggatctcgctctgtcaggtaaaaag
agtgtcacgctggggagtagtcctgctcgtctacatattctgcctgagggcgatggcacc
agtagcgtctttgccactacagagcacgccagcctcatctacagctctgaggggcgcatc
gtatactctgccacaaccgcggacgatgccacctatgtcgttcccttcgattccgaggca
ttccccgactctatactgctctcgactgataaacacgttcgtttatgccatgtcgataaa
gagcgcctcacgcacgtcaagtcactaccagtatttgagacagttcgacgtgtcgcttac
gccccaggtgtaaaggcatttgctctcggctgcgtcaagaaagagctcgtacataacgaa
gaagtcatcacatgctcagtgaagctcgttgacgaaatcatattccaagaacttggcgct
ccactccaactcaatgcctctagcacactggaaatggttgaaagcgtcatccgcgctgag
cttcccgaccacactggtgctctagtggagcgtttcattgtgggcacaagctttgtcact
ggtgaagaagtcggtgaagccggggagacacgtggtcggatactggtcttgggagtagac
gaggaacgccagctatacactatcgtatcgcacaatctgaaaggcgcgtgccgctgcttg
agtgtcatagatgagtacattgttgctggtctttccaagacagttgttgtctacagctat
acggaagaaaccagcaccgagggctctctgcagaagcttgcggcttaccgcccagcgacc
tttccactggcaattgatgtatctgggaacatgattggcgttgctgatctgatgcagtca
ttatctttggtggagttcacgccaccaaaacatggagaacccgccaaactagaggagaag
gctaggcatttccaatcagcgtgggcgacttcagtttgccatctggatgatgagcgatgg
ctggaggcagatgcgcagggtaacattattgtgctggcgcggaattcggatgcgccaacg
gagcaagaccgcggccgtctcgaaataacgagcgagatacaccttggcgaacagatcaac
aagatgcgaaagctgaatgtggcgccgacggacaatgctgccgtatcaccaaaggcgttt
cttgcctctattgagggcacgctatatctctacggcgacattgcgccacaatatcaagac
ctactcattacgctccagacaaatatagagcagcacgtcaaaacggcgggaggcatcaac
ttccacgcttggcgatcctttcgcaaccagactcgagaagcggatggcccgttccggttt
gtggacggcgaaatggtggagaggtttcttgacttgaacgaggcaacgcaggctgagctc
tgcaaagatctcggccccagcgtggaggatgtgcggaacctgattgaggaattgcgtcgg
atgcattaa
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integrated database retrieval system