KEGG   Akanthomyces muscarius: LMH87_010559
Entry
LMH87_010559      CDS       T09501                                 
Name
(RefSeq) hypothetical protein
  KO
K10610  DNA damage-binding protein 1
Organism
amus  Akanthomyces muscarius
Pathway
amus03420  Nucleotide excision repair
amus04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:amus00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    LMH87_010559
  09124 Replication and repair
   03420 Nucleotide excision repair
    LMH87_010559
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:amus04121]
    LMH87_010559
   03400 DNA repair and recombination proteins [BR:amus03400]
    LMH87_010559
Ubiquitin system [BR:amus04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Adoptor protein
     LMH87_010559
DNA repair and recombination proteins [BR:amus03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      LMH87_010559
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      LMH87_010559
SSDB
Motif
Pfam: MMS1_N CPSF_A
Other DBs
NCBI-GeneID: 80897718
NCBI-ProteinID: XP_056054754
LinkDB
Position
5:3668060..3671699
AA seq 1162 aa
MAYVAPVHLPTSIRHAIRLQFSSPDHDDLIVAKANRLEIWRVTQEGMTCLHTKVVHGTIC
MLQRLRPKDAVTDLLFVGTERLQYFNVSWNPEKNEMELNYEAIHDIAEPYMRESQSQNKC
LVDPTAKYMVMHMWEGVLNVFRLPSRRGASDKLEQMDQIRLTELWMKDSAFIHSRTGHPR
IAFLYKTQLDQEEARVAVYRLTKDDKGSDVSKFDPHKDRELDQVIADPYASMLIPVPVAE
EKRYHVRKTEGTRAHLGGLLVVGETLLTYFDSLTYSSVSSALDEPKIYVAWAMYDETHYF
LADDYGRLDLMTLETYAEPTGVVVTGMTVESLRFPDSKDLTSRASNLVYMGDGMLFVASH
HGDSQLLQIDLASRTMYPIKLLSNNGPILDFAIMDMGNREGDNQQGNVFSSGQARIVAGC
GAYRDGSLRSIRSGVGLEDYGILDEIQNTKGLFTIKSHGSKKVDTLVASFVMETRVFRFD
ADGDIEEVYEFAGMNLEAETLVATNLPNGHLLQVTTSEAAVFDLENGMRISSWATESGGE
ITAASCNGKWVLLCVDGTILVSLNVDKDLAACTQRYQGTNDSSQSDQISCLHASPDLKDY
GVVGWWNSGKITIVDLLTLSAKHGETLQQTSDAASVPRDISLVQLHPRSASGPTLLVALE
DGTVVNFNVSVEDLALSGKKSVTLGSSPARLHILPEGDGTSSVFATTEHASLIYSSEGRI
VYSATTADDATYVVPFDSEAFPDSILLSTDKHVRLCHVDKERLTHVKSLPVFETVRRVAY
APGVKAFALGCVKKELVHNEEVITCSVKLVDEIIFQELGAPLQLNASSTLEMVESVIRAE
LPDHTGALVERFIVGTSFVTGEEVGEAGETRGRILVLGVDEERQLYTIVSHNLKGACRCL
SVIDEYIVAGLSKTVVVYSYTEETSTEGSLQKLAAYRPATFPLAIDVSGNMIGVADLMQS
LSLVEFTPPKHGEPAKLEEKARHFQSAWATSVCHLDDERWLEADAQGNIIVLARNSDAPT
EQDRGRLEITSEIHLGEQINKMRKLNVAPTDNAAVSPKAFLASIEGTLYLYGDIAPQYQD
LLITLQTNIEQHVKTAGGINFHAWRSFRNQTREADGPFRFVDGEMVERFLDLNEATQAEL
CKDLGPSVEDVRNLIEELRRMH
NT seq 3489 nt   +upstreamnt  +downstreamnt
atggcttatgtggcgccagtgcatctgccgaccagcatccgccatgcgatccgactccaa
ttcagctccccggaccatgatgacttgattgtcgccaaagcgaatcgactcgagatatgg
cgcgtcacgcaagagggcatgacgtgtctgcacaccaaagtcgtgcatggcacgatatgc
atgctgcagcgcttgcgaccgaaagatgccgtcaccgatctcctcttcgtcggtaccgaa
cgactgcaatacttcaacgtctcctggaatccggaaaagaacgaaatggagctcaactat
gaggctattcacgacattgccgagccgtacatgcgcgaatcgcaaagtcagaacaagtgc
ctggtggatcccacggcgaaatacatggtgatgcacatgtgggagggcgtgctcaacgtg
ttccgcttgcctagtaggcgcggtgcatctgacaagctcgaacaaatggaccagatccgc
ctcacggagctgtggatgaaggacagcgcgttcatccatagtcgtacaggccatcctcgc
atcgcatttctctacaagacccagcttgaccaggaggaagctcgtgtcgccgtttacaga
ctgacaaaagacgacaaaggcagcgatgtgtcgaagttcgacccgcacaaggatcgagag
cttgatcaagtcatcgccgacccgtacgcatccatgttgattcctgtgccggtcgccgag
gaaaaacgataccatgtgcgaaagactgaaggcacgagggcacatttgggcggtctactg
gtcgtgggcgagaccttgttgacgtattttgatagcttgacatattcgagcgtgtcatct
gcgctcgacgaaccgaagatatacgtcgcatgggccatgtacgatgaaacccactatttc
ctcgccgacgactacggacgactagacttgatgactctggaaacctacgcagagccaacc
ggggttgttgttacgggcatgactgttgagtctctcaggtttccggactccaaggacttg
acctcccgggcatcaaatcttgtttacatgggcgacggcatgcttttcgtggcctcccac
cacggcgactctcagctcttgcagatcgatctcgcctctcgtaccatgtatccgataaag
cttctttccaacaacggaccgattttggattttgcaatcatggatatgggaaatagagaa
ggtgacaaccagcagggcaacgtattttcgtcggggcaagccagaattgtcgcgggctgc
ggtgcatacagggacgggtccttacgcagcatcagaagtggtgttgggctggaagattat
ggcattctggatgaaatccaaaacacaaaaggactgttcacaataaagtcgcacggctcc
aagaaggtcgacacgcttgttgcttctttcgtcatggagacccgcgtctttagattcgac
gcagatggtgatatcgaggaagtctatgaattcgctggcatgaatttagaagctgagaca
ttggtcgcgaccaacttgcctaatgggcacctgctccaagtcacaacatcagaggccgcg
gtctttgaccttgaaaatggcatgaggatatcgtcatgggcgacagaaagtggtggagaa
atcacagctgcctcatgcaacgggaaatgggtgctgctttgcgttgacggaaccatactt
gtgtcgttgaatgttgacaaagacttggcagcttgcacacagcgctaccaggggaccaat
gactcgagccagtctgaccaaatctcatgtttacatgcctcgccggatctgaaagactat
ggcgtcgttgggtggtggaactctggcaagattacaatcgtggatctcttgacactcagc
gccaagcatggtgaaacccttcagcagactagtgatgccgcttcagtacctcgcgacata
tcgctggtccagctccatccccgcagcgcatcaggccccacacttttggttgctttggaa
gacggaactgttgtcaactttaacgtctctgttgaggatctcgctctgtcaggtaaaaag
agtgtcacgctggggagtagtcctgctcgtctacatattctgcctgagggcgatggcacc
agtagcgtctttgccactacagagcacgccagcctcatctacagctctgaggggcgcatc
gtatactctgccacaaccgcggacgatgccacctatgtcgttcccttcgattccgaggca
ttccccgactctatactgctctcgactgataaacacgttcgtttatgccatgtcgataaa
gagcgcctcacgcacgtcaagtcactaccagtatttgagacagttcgacgtgtcgcttac
gccccaggtgtaaaggcatttgctctcggctgcgtcaagaaagagctcgtacataacgaa
gaagtcatcacatgctcagtgaagctcgttgacgaaatcatattccaagaacttggcgct
ccactccaactcaatgcctctagcacactggaaatggttgaaagcgtcatccgcgctgag
cttcccgaccacactggtgctctagtggagcgtttcattgtgggcacaagctttgtcact
ggtgaagaagtcggtgaagccggggagacacgtggtcggatactggtcttgggagtagac
gaggaacgccagctatacactatcgtatcgcacaatctgaaaggcgcgtgccgctgcttg
agtgtcatagatgagtacattgttgctggtctttccaagacagttgttgtctacagctat
acggaagaaaccagcaccgagggctctctgcagaagcttgcggcttaccgcccagcgacc
tttccactggcaattgatgtatctgggaacatgattggcgttgctgatctgatgcagtca
ttatctttggtggagttcacgccaccaaaacatggagaacccgccaaactagaggagaag
gctaggcatttccaatcagcgtgggcgacttcagtttgccatctggatgatgagcgatgg
ctggaggcagatgcgcagggtaacattattgtgctggcgcggaattcggatgcgccaacg
gagcaagaccgcggccgtctcgaaataacgagcgagatacaccttggcgaacagatcaac
aagatgcgaaagctgaatgtggcgccgacggacaatgctgccgtatcaccaaaggcgttt
cttgcctctattgagggcacgctatatctctacggcgacattgcgccacaatatcaagac
ctactcattacgctccagacaaatatagagcagcacgtcaaaacggcgggaggcatcaac
ttccacgcttggcgatcctttcgcaaccagactcgagaagcggatggcccgttccggttt
gtggacggcgaaatggtggagaggtttcttgacttgaacgaggcaacgcaggctgagctc
tgcaaagatctcggccccagcgtggaggatgtgcggaacctgattgaggaattgcgtcgg
atgcattaa

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