Akanthomyces muscarius: LMH87_011097
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Entry
LMH87_011097 CDS
T09501
Name
(RefSeq) hypothetical protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
amus
Akanthomyces muscarius
Pathway
amus03022
Basal transcription factors
amus03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amus00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LMH87_011097
09124 Replication and repair
03420 Nucleotide excision repair
LMH87_011097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amus03021
]
LMH87_011097
03400 DNA repair and recombination proteins [BR:
amus03400
]
LMH87_011097
Transcription machinery [BR:
amus03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LMH87_011097
DNA repair and recombination proteins [BR:
amus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LMH87_011097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
80898256
NCBI-ProteinID:
XP_056052059
UniProt:
A0A9W8QAU4
LinkDB
All DBs
Position
4:1359725..1361396
Genome browser
AA seq
508 aa
AA seq
DB search
MAANPQPALQLADYLEKLPGTTFRKLYQQPSTAFAIFRRMLPQLAKTFVMRMLYMPSPMS
LADLDTWVKPEAKRQKDQMLSTLRSLHIVQISAPSKDKTQHVQLTANFRASMRLALTGGG
NHNSFGVPSTLAVPPEIDMPFLDRYARRRWDDILHFVVSSVGYKSGGGGAGGGADGAGPN
KTVKDILVAGRLVDRRPNGSVGITQAGFTFLLQEANAQVWTLLLLWLDAMEADKSAAVDV
LSFLFVLASLDLGRAYDTNALTEQRRDMLPALADFGLVYIPPQKRSMFFPTRLATTLTSG
AGSSSLRSISDGVAAATSAALSSSSSANPNPSSSNSSGPLGSSGDQTGSVVIETNYRLYA
YTQSTLQIAVLALFSKLGMRFPDMVAGRITRTSIRQAIQFGITADQIIAYLAAHAHEQMH
RTAALTSKPVLPPTVVDQIRLWQLENERMKTTGGFLFRDFDDTKEYQDTRRFADEIGVLV
WSNDKTGMFFASKFEQIRDYLKSRKKAE
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaatccgcagccggcgctgcagctggccgactacctggagaagctgccgggg
accacgtttcggaagctctaccagcagccttcgacagcctttgccattttccggcgcatg
ctgccgcaactcgccaaaacattcgtgatgcgcatgttatacatgcccagcccgatgagc
ctggctgacctggacacatgggtaaagcccgaagcgaaaagacaaaaagaccagatgctc
tcgacgctccgatcccttcacattgtgcagatatccgccccttccaaggacaagacgcag
cacgtccagctcacggccaactttcgcgcctcgatgcgcctcgccctcaccggcggcggc
aaccacaactcctttggcgtgccctcgaccctcgccgtcccgcccgagattgacatgccc
tttctcgaccgctacgcgcgccgccgctgggacgacatcctgcactttgtcgtctcctct
gtcggctacaagtcgggcggcggcggagcaggcggcggcgcagacggcgcgggccccaac
aagacggtcaaggacatactcgtcgcgggccgcctcgtcgaccgccgccccaacggcagc
gtcggcatcacacaggccggcttcacctttctcctgcaagaggccaacgcgcaggtctgg
acgctgctgctgctgtggctcgacgccatggaggccgacaagagcgccgccgtcgacgtg
ctctcgtttctcttcgtcctggccagcctggacctcggccgcgcgtatgacacaaacgcc
ctcaccgagcagcgccgcgacatgctccccgcgctcgccgactttggcctcgtctacatc
cccccgcagaagcgctccatgttcttccccacgcgcctcgccacgacgctcaccagcggc
gccggcagcagcagccttcgcagcatcagcgacggtgtcgcggccgccacctcggccgcc
ctctcctcctcctcctccgccaacccgaacccgtcaagcagtaacagcagcggcccgctc
ggcagctccggcgatcagaccggctccgtcgtcatcgagaccaactaccgcctctacgcg
tacacgcagtcgacgctgcaaatcgccgtcctcgccctcttctccaagctcggcatgcgc
ttccccgacatggtcgccggccgcatcacccgcacctccatccgccaggccatccagttc
ggcatcaccgccgaccagatcatcgcctacctcgccgcccacgcccacgagcagatgcac
cgcaccgccgccctcaccagcaaacccgtcctgcccccgaccgtcgtcgaccagatccgc
ctctggcagctcgagaacgagcgcatgaagacgacgggcggcttcctgttccgcgacttt
gacgacaccaaggagtaccaggacacgaggcgcttcgccgacgagattggcgtcctggtc
tggagcaacgacaagacgggcatgttcttcgccagcaagtttgagcagatacgcgactac
ctcaagagtaggaaaaaggctgaatga
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