Acidiphilium multivorum: ACMV_04790
Help
Entry
ACMV_04790 CDS
T01446
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
amv
Acidiphilium multivorum
Pathway
amv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACMV_04790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amv03019
]
ACMV_04790
03009 Ribosome biogenesis [BR:
amv03009
]
ACMV_04790
Enzymes [BR:
amv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
ACMV_04790
Messenger RNA biogenesis [BR:
amv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACMV_04790
Ribosome biogenesis [BR:
amv03009
]
Prokaryotic type
rRNA processing factors
ACMV_04790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
BAJ79826
UniProt:
F0J3H0
LinkDB
All DBs
Position
548551..551271
Genome browser
AA seq
906 aa
AA seq
DB search
MTKTMLIDASHAEETRVVVLDNNRLDDFDIEAADRKQIKGNIYLAKVIRVEPSLQAAFVE
YGGNRHGFLAFAEIHPDYYQIPVADRQKLLELEAEEARRRVEAEDAEDEQEAALAAPRPP
RVTEIAIGDAPPDAEGQVDAEAAAAPAEVGEAEADSGPEASGAGAGEDRAGEGAEATATP
PEQVGGDDGVDGAEEAQERRRLRALRSYKIQEVIHRRQIMLVQVVKEERGSKGAALTTYI
SLAGRFSVLMPNSPNGGGVSRKITSLADRRRLKEAIAELEIPQGMGMIVRTAGANRPKPE
IKRDCEYLLRLWDDIRERTLASIAPALVYEEASLIKRTIRDVYTRDVDQVLIEGEDGFRS
ARDFMRMLMPTHVKKVQQWTERQPLFAKHNVEQMLDQMFQPTVQLKSGGYLVINQTEALV
AIDVNSGRATRERNIEDTALRTNLEAAEEVARQLRLRDLAGLIVVDFIDMETRKHNAMVE
RRLKDALKNDRARIQVGSISHFGLLEMSRQRLRPSLAETMLIACPHCQGVGHVRSTASTA
LAVLRAIEDEAARQAAELLVHLTPDVALYIFNHKRAQIAATEARFGMKVVFVADGTVPAT
FKIEKVKAHAARPQETPAPTFRAPAETEEVEAEQQGDEVATEDAAGNAGKAADEVERRRR
RRRRRRGGRREDLVSAPTGEQPEIAGIPAEFESRMNDVLPTAARADAAEAPAPEVTMEPA
VADTAPAVPEPAKEPEVVETAPAATEAAPSLAGEVPAPEAEAETKPKRRAPARPRSPTTR
RRRAAASQAAEPEVQQPVFTDIADIFEAAEQAEARAPKPRRTRRPKARPMEAETAVADAP
ATTEAVAEVSAAPQDGSASAGNVAGAEAPVANEGQAAPGAAVQPVLIGASETPTAARKRG
WWKRPA
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagaccatgctcatcgacgccagccacgcggaagaaacccgcgttgtggtgttg
gacaacaaccgcctcgatgatttcgatatcgaggctgccgacaggaagcagatcaagggc
aacatctacctcgcgaaagttatccgggtagagcccagcctacaggccgccttcgtcgaa
tacggcggcaaccggcacgggtttctcgccttcgccgagattcatcccgactattatcag
atccctgtcgccgaccggcagaagctgctggaactcgaggcggaggaggcgaggcgccgc
gtcgaggccgaggatgccgaggacgagcaggaggcggcgctcgcggcgccgcggccgccg
cgggtgacggaaatcgcgatcggcgacgcgccgccggatgccgagggccaggttgacgcc
gaggccgccgccgcgccggctgaggtcggtgaggccgaggcggactccggacctgaagcc
agtggcgccggcgcgggcgaggaccgggcgggggagggcgcagaggcgacggcgaccccg
cccgagcaggtcggcggggatgacggcgtcgacggcgcggaggaggcgcaggagcgccgc
cggctgcgcgccctgcgctcgtacaagattcaggaagtgatccatcgccggcagatcatg
ctggtgcaggtggtgaaggaggagcgcggctcgaaaggcgcggcgctgaccacctatatt
tcgcttgccggccgcttttcggtgctgatgccgaattcgccgaatggcgggggcgtgtcg
cgcaagatcacctcgctggctgatcgtcgccggctgaaggaggcgatcgccgagctcgag
attccgcagggcatgggcatgatcgtccgcaccgccggcgcgaaccggccgaagccggaa
atcaagcgcgactgcgaatatctgctgcggttgtgggacgatatccgcgagcgtaccctg
gcctcgatcgcgccggcgttggtgtatgaggaggcctcgctgatcaagcggaccatccgc
gacgtctatacccgcgacgtggaccaggtgctgatcgagggcgaggacggattccgctcg
gcgcgcgacttcatgcggatgctgatgccgacgcatgtgaagaaggtccagcaatggacc
gagcggcagccgctgttcgccaagcacaatgtcgagcagatgctcgaccagatgttccag
ccgacggtgcaactgaagtccggcgggtatctggtgatcaaccagaccgaggcgctggtt
gcgatcgacgtgaactcgggccgggcaacgcgggagcggaatatcgaggataccgcgctg
cggaccaatctggaggcggcggaggaagtggcgcggcagttgcgcctgcgcgacctcgcg
gggctgatcgtggtcgatttcatcgacatggagacccgcaagcacaacgcgatggtcgag
cggcggctgaaggatgcgctgaaaaacgaccgcgcgcgcattcaggtgggcagtatcagc
catttcggcctgctggaaatgagccgccagaggctgcggccgtcgctggccgagaccatg
ctgatcgcctgcccgcattgccagggcgtggggcatgtgcggagcacggcgagcaccgca
ctcgcggtgttgcgcgcgatcgaggacgaggcggcgcgccaggccgccgagttgctggtg
cacctgactccggatgtcgcgctctatatcttcaatcacaagcgtgcgcagattgccgcc
accgaggcgcggttcggcatgaaggtcgtcttcgtcgcggatggcaccgttccggccacc
ttcaagatcgagaaggtgaaggcgcatgcggcgcggccgcaggaaacgccggcgccgaca
ttccgtgcgccggccgagacggaggaggtcgaggcagagcagcaaggtgacgaggtcgcg
acggaggacgccgccggcaacgcaggaaaggcggccgatgaggtcgaacgccgccgccgc
cgccgccgccgccgccgtggcggccgtcgggaggacctggtgtccgcgcccactggcgag
cagccggagatcgccggaataccggccgagttcgaatcgcgcatgaacgacgtgttgccg
accgccgcccgtgccgatgcggctgaagcgccggcaccggaagtcacgatggagccggcc
gtcgccgacactgcgccggccgttcctgagcccgcaaaggaacccgaggtcgtggagacg
gcaccggccgccacggaggccgctccgtcccttgccggcgaagtgccggcgccggaagcg
gaggcagagacaaagccgaagcgtcgagcgcccgcccgcccgcgtagcccgacgacccgg
cggcggcgcgccgctgcgtcgcaggccgccgagcctgaggttcagcaaccggtcttcacc
gatatcgcggatatttttgaggctgccgaacaggcggaagcccgcgcgcccaagccccgc
cggacccgtcggccgaaggcaaggcccatggaagcggagactgcggtggctgacgcgcct
gcaaccaccgaagcagtcgccgaggtgagcgccgcgccgcaggatggctcggcgtctgcc
gggaatgtcgctggcgccgaagcgcctgttgccaatgaagggcaggcagcaccaggggcg
gcggtgcaacccgttctgattggtgccagcgaaacgccgaccgccgcgcgcaagcgcggc
tggtggaagcgcccagcctga
DBGET
integrated database retrieval system
