Acidiphilium multivorum: ACMV_09500
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Entry
ACMV_09500 CDS
T01446
Symbol
rnjA
Name
(GenBank) ribonuclease J 1
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
amv
Acidiphilium multivorum
Pathway
amv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACMV_09500 (rnjA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amv03019
]
ACMV_09500 (rnjA)
Messenger RNA biogenesis [BR:
amv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACMV_09500 (rnjA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B
Lactamase_B_2
RMMBL
RNase_J_C
Xan_ur_permease
Motif
Other DBs
NCBI-ProteinID:
BAJ80297
UniProt:
F0J641
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Position
complement(1080636..1082282)
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AA seq
548 aa
AA seq
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MNEISKGLSFTPLGGTGEIGMNLNVYGLDGDLLVVDCGMGFAGPEAPEAELLVPDPAFLA
ANRDRIAGLVITHAHEDHIGGIARIWDALRCPVYATPFAAALIRYRLGEAGLLRSVRITE
IQPGAAFEVGPFALRYIRMSHSTPESQALVLTTKYGTVLHTGDWKLDPEPLIGPPTDEAA
LEALGDAGVLAMICDSTNALVEGHSGSEATVRRSLTSLIAGLRGRIVVTCFASNIARIDT
VVKAAAAAGRHVALVGRSLGKYVEAAQEAGYLADLPDFVPEDEVGAIPDDSLLILATGSQ
GEKRSALARIAADTHRNVALGEGDTVIFSARVIPGNERAIGAVQDELVRAGVNVMTDDDH
MVHVSGHPARDELRRLYRLVRPKYLVPTHGEWRHMAAQADLAEAAGISTFLLEDGDVLRL
APEPPQVVDSVPVGRLAVDGDRLVPMQGGVMAARRRMMLNGVVVASIAVDRAGKVKGGAQ
IAAPGLFEADDHALGALAEDFVATFEDLPANLRTDRNAVKEAAQAALRRALGRRFGKRPM
VEVHVLHI
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagatcagcaaggggctgagtttcaccccgctcggcggcaccggcgagatcggc
atgaacctgaacgtctacgggctggatggtgatctgctggtggtcgattgcggcatgggc
ttcgccggaccagaggcgcccgaagcggagttgctggtgcccgacccggcgtttctggct
gccaaccgggaccgcatcgccggcctggttatcacccatgcgcacgaggaccatatcggc
ggcatcgcgcggatctgggacgcgctgcgctgcccggtctacgcaacgcccttcgccgcg
gcgctgatccgctaccggctcggcgaggccgggctgctgcgcagcgtgcgcatcaccgaa
atccagcctggcgcggccttcgaggttggcccctttgcgctgcgctatatccgcatgtcg
cactcaacgccggagtcgcaggcactcgtcctcaccacgaaatacggcaccgtgctgcat
acgggtgactggaaactcgatccggagccgctgatcggcccaccgaccgacgaggcggcg
ctcgaggcgctgggcgatgcgggcgtgctggcgatgatctgcgattcgaccaatgcgctg
gtcgaggggcattccggctcggaagcgaccgtgcgacgcagcctgacgagcctgatcgcg
gggctgcgcggtcgcatcgtcgtcacctgtttcgcgagcaacatcgcccggatcgatacg
gtggtgaaggccgccgccgccgccggccggcatgtcgcgctggtgggacgcagcctcggc
aaatatgtcgaggcggcgcaggaagcgggctatctcgccgacctgccggatttcgttccc
gaggacgaggtcggcgccattccggatgacagcctgctgatcctcgccaccggcagccag
ggcgagaagcgctcggcgctggcgcggatcgccgccgatacgcatcgcaacgtcgcgctg
ggcgagggcgataccgtgatcttctccgcccgcgtgatccccggcaacgaacgggcgatc
ggcgcggtgcaggacgagttggtccgcgccggcgtgaacgtgatgaccgacgacgatcac
atggtgcatgtctccggccatccggcccgcgacgaactgcgccggctctaccgtctggtc
cgtccgaaatatctggtgccgacccatggcgaatggcgccacatggcggcgcaggccgat
ctggccgaggcggccggcattagcacgttccttctggaggatggcgatgtgctgcgcctc
gcgcccgaaccgccgcaggtggtcgacagcgttccggtcggccggctcgcggtggacgga
gaccggctggttccgatgcagggcggcgtaatggccgcgcgacggcggatgatgctcaac
ggcgtcgtggtcgccagcatcgcggtcgaccgcgccggcaaggtgaagggcggggcgcag
atcgccgcgccaggcctgttcgaagccgatgatcatgcgctcggcgcgctggccgaagac
tttgtcgcaaccttcgaggacctgccggccaacctgcggaccgaccggaatgcggtgaag
gaggcagcgcaagcggccctgcgccgcgcgctcgggcggcgtttcggcaaacggccgatg
gtcgaggtgcatgtcctgcacatatga
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