Acidiphilium multivorum: ACMV_10510
Help
Entry
ACMV_10510 CDS
T01446
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
amv
Acidiphilium multivorum
Pathway
amv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
amv00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ACMV_10510 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amv03021
]
ACMV_10510 (rpoD)
Transcription machinery [BR:
amv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACMV_10510 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ADIP
BST2
Motif
Other DBs
NCBI-ProteinID:
BAJ80398
UniProt:
F0IWY8
LinkDB
All DBs
Position
complement(1191625..1193541)
Genome browser
AA seq
638 aa
AA seq
DB search
MATKQAAPAETAAPEAEADTATLDIQSASVKRLIARGKERGYITFDELNAVLPSEQNSSE
QIEDVMSMLSEMGIQVVEGEEGEEAETAGRAEKDEEAAEDEEAASGNISESSGSRTDDPV
RMYLREMGTVELLSREGEIAIAKRIEAGRDMMIGGLCESPLTFRAIISWHESLKDGKMLL
RDVIDLEATQGGGDGGFNPSAAVPEEPEEDEEGESSGLSLSAVEEKLKPEVFETFTEVEK
LYEKFMKLQHKRLEALNAGEEMASRSEKTYEKLRDELVAKVEQVSLHNNRIEELVIQLKE
LNQRLNGLEGQMLRLAEGCKITRDDFLDAYRGREMDPTWLDDVAKRPGKGWKVFVERYGT
QVTELRAQIGRIAAEAQLPIEEFRRVYSTVSRGERDSTRAKKEMIEANLRLVISIAKKYT
NRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVH
MIETINKLVRTSRQMLHEIGREPTPEELAEKLGMPLEKVRKVLKIAKEPISLETPIGDEE
DSHLGDFIEDKNAIIPLDAAVHANLREAATRVLSSLTPREERVLRMRFGIGMNTDHTLEE
VGQQFNVTRERIRQIEAKALRKLKHPSRSRKLRSFLED
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaaacaagctgctcccgccgagaccgccgcgcccgaggccgaggcggacacc
gcgacgctcgacatccagtcggcctcggtcaagcgcctgatcgcccgcggcaaggagcgg
ggctacatcaccttcgacgagctgaacgccgtcctgccctccgagcagaacagctccgag
cagatcgaggacgtgatgtcgatgctcagcgaaatgggcatccaggtggtcgagggcgag
gaaggcgaggaggcggaaaccgccggccgcgccgagaaggacgaggaggccgccgaggac
gaggaggccgcctccggcaatatcagcgaatcgagcggcagccgcaccgacgatcccgtc
cgcatgtacctgcgcgagatgggcacggtcgagctgctctcgcgcgagggcgagatcgcc
atcgccaagcgcatcgaggccgggcgcgacatgatgatcggcgggctctgcgaaagcccg
ctgaccttccgcgcgatcatctcgtggcacgaatccctcaaggacgggaagatgctgctg
cgcgacgtgatcgacctcgaggccacccagggcggcggcgatggcggcttcaacccctcc
gccgcggtccccgaggaacccgaggaggacgaggagggcgaatcgagcggcctctcgctc
tccgccgtcgaggagaagctcaagcccgaggtgttcgagaccttcaccgaggtcgagaag
ctctacgagaagttcatgaagctccagcacaagcggctggaggcgctgaacgccggcgag
gaaatggcctcccgctcggagaagacctacgagaagctgcgcgacgagctggtggccaag
gtcgagcaggtcagcctgcacaacaaccgcatcgaggagctggtcatccagctcaaggag
ctgaaccagcgcctgaacgggctggaaggccagatgctgcgcctcgccgagggctgcaag
atcacccgcgacgactttctcgacgcctatcgcggccgcgagatggaccccacctggctc
gacgacgtggcgaaacgccccggcaagggctggaaggtcttcgtcgagcgctacggcacc
caggtcaccgagctgcgcgcccagatcggccgcatcgccgccgaggcgcagctgccgatc
gaggaattccgccgcgtctattccaccgtctcgcgcggcgagcgcgactccacccgcgcc
aagaaggaaatgatcgaggccaatctccgcctcgtcatctccatcgccaagaaatacacc
aatcgcggcctgcaattcctcgacctgatccaggaaggcaatatcggcctgatgaaggcg
gtggacaaattcgaataccgccgcggctacaagttctcgacctacgccacctggtggatc
cgccaggcgatcacccgctcgatcgccgaccaggcgcgcaccatccgcatcccggtccac
atgatcgagacgatcaacaagctggtccgcacctcgcggcagatgctgcacgagatcggc
cgcgagcccacgcccgaggaactggccgagaagctcggcatgccgctcgagaaggtgcgc
aaggtgctcaagatcgccaaggagccgatctccctcgaaaccccgatcggcgacgaggaa
gacagccatctcggcgacttcatcgaggacaagaacgcgatcatcccgctcgatgccgcg
gttcatgccaacctgcgcgaggccgcaacgcgcgtcctctcctcgctcaccccgcgcgag
gagcgcgtgctgcgcatgcgcttcggcatcggcatgaacaccgaccacacgctggaagag
gtcggccagcagttcaacgtcacccgcgagcgcatccgccagatcgaggcgaaggccctg
cgcaagctcaagcacccctcgcgcagccgcaagctcaggagcttcctcgaggactga
DBGET
integrated database retrieval system
