Acidiphilium multivorum: ACMV_13420
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Entry
ACMV_13420 CDS
T01446
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
amv
Acidiphilium multivorum
Pathway
amv03410
Base excision repair
amv03430
Mismatch repair
amv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACMV_13420 (recJ)
03430 Mismatch repair
ACMV_13420 (recJ)
03440 Homologous recombination
ACMV_13420 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amv03400
]
ACMV_13420 (recJ)
DNA repair and recombination proteins [BR:
amv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ACMV_13420 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ACMV_13420 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ACMV_13420 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
BAJ80689
UniProt:
F0IY29
LinkDB
All DBs
Position
complement(1518611..1520395)
Genome browser
AA seq
594 aa
AA seq
DB search
MDAGLNGAAPAFGVERSLTGRRWLWRPAADRTAQAIAQRCGVPDVIGRLLAGRGVMPDHA
ADFLEPTLRAYLPDPSALTDMDAAAARIADSVQRGATIAIFGDYDVDGACSGALMALGLG
ELGATTINYVPDRLREGYGPNAPALRALAGQGAELVVCVDCGTAAHEALAALDGRADAIV
LDHHKSEGAPPAIVATVNPNRADDASGLGNVCAATISFLTLVAVQRELRRRGFFATRREI
DLLSMLDLVALATVCDVMPLTGLNRALVTQGLKVMARRERPGIAALLDVAQVREAPGTMT
CGFAIGPRINAAGRIAEADLGLRTLLAAEPATAMVLARRLDEINRERQAVEAGLLDEAMT
DAEAQFAAGAPVALVAGEQWHPGVVGIVAGRIKETFNRPALVAGIAEGRAVGSGRSVPGV
DLGSAIIAAREAGLLIKGGGHAMAAGFTVEAGRIEALRGFLAERLAVAATLPDAADLPIE
GMAAVGGIDEALAAAIGRVGPFGAGNEEPVFVVPRARVLRADRIGRNEATIRAFVEGEAG
GRLKTILFRAGDGDLAAALARPGGAPLNLAGHIRAEQWNGRTSVSLILIDAAPA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
gtggacgccggcctgaacggggcggcgccggctttcggggtcgaacgcagcctgaccggc
cggcgctggctctggcgcccggccgcggaccgcacggcgcaggccatcgcccagcgctgc
ggcgtgccggacgtgatcggccggctgctcgccgggcgcggcgtgatgcccgatcatgcc
gcggatttcctcgagccgacgctgcgcgcctatctgcccgatccctcggcgctgaccgac
atggatgccgcggcggcgcggatcgccgattcagtgcagcgcggcgcgaccatcgcgatc
tttggcgattacgatgtcgacggcgcctgttcgggcgcgctcatggcgctgggccttggg
gaacttggcgcgacgaccatcaattacgtgccggatcggctccgcgagggctacgggccg
aacgcgccggcgctgcgggcgcttgccgggcagggggcggaactggtcgtctgcgtcgat
tgcggaacggcggcgcatgaggcgctcgcggcgctcgacggccgggcggatgccatcgtt
ctcgaccatcacaagagcgagggggctccgcccgccatcgtggcgacggtgaacccgaac
cgcgctgacgatgcgtcgggcctcggcaacgtttgcgcggcgacgatcagcttcctcacc
ctcgtcgccgtgcagcgcgaacttcgccggcggggcttcttcgcgacgcggcgcgagatc
gacctgctgtcgatgctcgacctcgtcgcgcttgcgacggtctgcgacgtgatgccgctc
accggcctcaaccgcgcgctggtgacccaggggctgaaggtgatggcgcggcgggaacgg
ccgggaatcgcggcattgctcgacgtcgcgcaggtgagggaggcgccgggcacgatgacc
tgcggcttcgcgatcggcccgcggatcaacgccgccggccgcatcgccgaggcggatctc
gggctgcgcacgctgctcgccgccgagccggcgacggcgatggtgctggcgcgccgcctc
gacgagatcaaccgcgagcgccaggcggtggaggccgggctgctggacgaggcgatgacc
gacgccgaggcccagttcgccgccggcgcgccggtcgcgctggttgccggcgagcaatgg
catccgggcgtggtcggcattgtcgccggccggatcaaggaaaccttcaaccgtccggcc
ctggtcgcgggaatcgcggagggcagggcggtgggttctggccgctcggtgccgggggtc
gatctcggcagcgcgatcatcgccgcgcgcgaggcggggctgctgatcaagggcggcggc
cacgccatggccgcgggtttcacggtggaagccggtcggatcgaggcgctgcgcggcttc
ctcgcagagcggttggcggtggccgcgacgctgccggacgcggccgatctgccgatcgag
ggcatggcggctgtcggcgggatcgacgaggcgctcgccgcggcgatcggccgcgtcggg
ccgttcggcgccggcaacgaggagccggtgttcgtggtgccgcgggcgcgggtcctgcgg
gcggaccgcatcggccggaacgaggcgacgatccgcgccttcgtcgagggcgaggccggt
ggccggctgaagacgatcctgttccgcgccggagacggcgaccttgcggccgcgctggcc
cgtccgggcggcgcaccgctcaatcttgcaggtcacatccgcgcggaacaatggaatggc
agaacctcggtcagcctgatcctgatcgacgccgctcccgcttga
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integrated database retrieval system
