Acidiphilium multivorum: ACMV_21950
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Entry
ACMV_21950 CDS
T01446
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
amv
Acidiphilium multivorum
Pathway
amv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
amv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACMV_21950 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amv03021
]
ACMV_21950 (rpoC)
03400 DNA repair and recombination proteins [BR:
amv03400
]
ACMV_21950 (rpoC)
Enzymes [BR:
amv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACMV_21950 (rpoC)
Transcription machinery [BR:
amv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACMV_21950 (rpoC)
DNA repair and recombination proteins [BR:
amv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACMV_21950 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
Peptidase_M23
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
BAJ81542
UniProt:
F0J0K6
LinkDB
All DBs
Position
complement(2416024..2420190)
Genome browser
AA seq
1388 aa
AA seq
DB search
MNDLMKILGQTGQAATFDQIRIQIASPEQIRSWSYGEIKKPETINYRTFKPERDGLFCAR
IFGPIKDYECLCGKYKRMKFRGIICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSL
PSRIATMVEMTLKDLEKVLYFENYIVLDPYTTDLKRYQLLSEDDLYAKQDEFGEDGFKAG
IGAEAVKSILAGIDLEAERAIMRADLKEATSEAKRKKLVKRLKLVEAFIESGTRPEWMIM
DVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKRML
QESVDALFDNGRRGRAITGTNKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGP
ELKLHQCGLPKKMALELFKPFIYAKLEKYGLATTIKAAKRMVEKERPEVWDILEEVIREH
PVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSIEAQLE
ARVLMMSTNNILNPANGKPIIVPSQDIVLGLYYLSLETPAFTGVEDKEAPLFGTMGEIEH
ALDSGYLKLHDKIRARVVRTHPDGSRTTEVVPTTPGRMMIGQLLPKHHDVPFALVNQLLT
KKKVSDVIDAVYRHCGQKESVIFCDRLMGLGFRQAAKAGISFGKDDMVIPAEKYGLLEKT
QAEVKEYEAQYHDGLITAGERYNKVIDAWSRCNDEVAAAMMREISRQDPGKPTNSVWMMS
HSGARGSPTQMRQLAGMRGLMAKPSGEIIEQPILSNFKEGLTVAEYFNSTHGARKGLADT
ALKTANSGYLTRRLVDVAQDCIIVTADCGTERGLTMRAVMDGGEVVSSLSERILGRTAAE
DVLDPADGSVIVKANELIGEIDSMHIEKLGVESVKIRSVLTCEAKVGVCAKCYGRDLARG
TPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQRGAEQSSVEASHDGTVTIRNRNVV
SNSAGAPIVMSRNCEIALNDASGRERARFRVPYGARLLVDEDQTVTRGQKLAEWDPYTLP
IITERAGLVEYADLLEGVTLVERVDEVTGLTSKVVVDYKQSAKGADLRPRLILKDERGEV
LRLANGAEARYFLSPDSILSVENGASVHAGDVLARIPREGSKTRDITGGLPRVAELFEAR
RPKDHAIIAETDGRVEFGKDYKAKRRIIVKNDETGEETEYLVPKGKHVSVQEGDYVHRGD
PLVDGPRVPHDILRVLGVEALSEYLINEIQDVYRLQGVKINDKHIEVVVRQMLQKIEITE
PGDTTYLVGELVDRIEFDEENERRLRAGERPAGGLPVLQGITKASLQTLSFISAASFQET
TRVLTEAATAGKTDQLLGLKENVIVGRLIPAGTGSVMSRLRSIAAGRDRSTLAATRPALP
ARDEVSAD
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatttgatgaagattctcggccagaccggtcaggccgccacgttcgaccagatc
cgtatccagatcgcctcgccggagcagatccgctcctggtcgtatggcgagatcaagaag
cccgagaccatcaactaccgcaccttcaagcccgagcgcgacggcctgttctgtgcgcgc
atcttcgggccgatcaaggactacgagtgcctgtgcggcaagtacaagcggatgaagttc
cgcggcatcatctgcgagaaatgcggcgtcgaggtcacgctggccaaggtgcgccgcgag
cgcatgggccatatcgagctcgcctcgccggtcgcgcatatctggttcctgaagtcgctg
ccgagccgcatcgcgacgatggtcgagatgacgctgaaggatctcgagaaggttctctat
ttcgagaactacatcgtgctcgacccctacacgaccgacctcaagcgctaccagctcctc
tccgaggacgatctctacgcgaagcaggacgagttcggcgaggacgggttcaaggccggc
atcggcgccgaggcggtcaagtcgatcctcgccggcatcgatctcgaggccgagcgggcg
atcatgcgtgccgacctgaaggaggctacctccgaggcgaagcgcaagaagctggtcaag
cgcctgaagctggtcgaggccttcatcgaatccggcacccgtccggaatggatgatcatg
gatgtcgtcccggtcattccgcccgaactgcgcccgctcgtcccactcgatggcggccgt
ttcgcgacgtcggacctgaacgatctctatcgtcgcgtcatcaaccgcaacaaccgcctc
aagcggctgatcgagttgcgcgcgccggacatcatcgtgcgcaacgagaagcgcatgctc
caggaatcggtcgacgcgctgttcgataacggccgccgcggccgcgcgatcaccggcacc
aacaagcgccccctcaagtcgctgtcggacatgctgaagggcaagcagggccgcttccgc
cagaacctgctcggcaagcgcgtcgactattcgggccgttcggtcatcgtcgtcgggccg
gagctgaagctgcaccagtgcggcctgccgaagaagatggcgctggagctgttcaagccc
ttcatctacgccaagctcgagaaatacggcctcgccaccacgatcaaggcggcgaagcgc
atggtcgagaaggaacgtcccgaggtgtgggacattctcgaggaggtgatccgcgagcat
ccggtgctgctcaaccgcgcgccgacgctgcaccgtctcggcatccaggccttcgagccg
atcctgatcgagggcaaggcgatccagctgcacccgctggtctgcaccgccttcaacgcc
gacttcgacggcgaccagatggcggtccacgtgccgctctcgatcgaggcgcagctcgag
gcccgcgtgctgatgatgagcacgaacaacatcctcaacccggccaacggcaagccgatc
atcgtgccgagccaggacatcgtgctcggcctctattacctctcgctcgaaactccggcc
ttcaccggtgtcgaggacaaggaagcgccgctcttcggcacgatgggcgagatcgagcac
gcgctcgattccggctatctgaagctgcacgacaagatccgcgcccgcgtcgtccgcacc
catccggacggcagccgcaccaccgaggtggtcccgaccacgccgggccgcatgatgatc
ggccagcttctgcccaagcatcacgacgtgccgttcgccctggtcaaccagctgctgacc
aagaagaaggtgtcggacgtgatcgacgccgtctaccgtcattgcggccagaaggagtcg
gtgatcttctgcgaccggctgatgggcctcggcttccgccaggcggccaaggccggcatt
tccttcggcaaggacgacatggtcatcccggccgagaaatacggcctgctggaaaagacc
caggccgaggtcaaggaatacgaggcgcagtatcacgacggtctcatcaccgccggcgag
cgctacaacaaggtgatcgacgcgtggtcgcgctgtaacgacgaggtcgcggcggcgatg
atgcgcgagatctcgcgccaggatcccggcaagccgaccaactcggtctggatgatgagc
cattccggcgcccgcgggtcgccgacccagatgcgccagctcgccggcatgcgcggcctg
atggccaagccgtcgggcgagatcatcgagcagccgatcctgtcgaacttcaaggaaggc
ctgaccgtcgccgaatacttcaactcgacccacggcgcccgcaagggcctcgcggacacc
gcgctgaagacggcgaactccggctacctcacccgccgcctggtcgacgtggcgcaggac
tgcatcatcgtcaccgccgattgcggcaccgagcgcggcctgaccatgcgcgcggtgatg
gatggcggcgaggtggtctcctcgctctccgagcgcatcctcggccgcaccgcggcggaa
gacgtgctcgacccggccgacggttcggtgatcgtcaaggcgaacgagctgatcggcgag
atcgactcgatgcatatcgagaagctcggggtcgagagcgtgaagatccgctcggtgctg
acctgcgaggccaaggtcggcgtctgcgccaagtgctacgggcgcgacctcgcgcgcggc
acgccggtcaatatcggcgaggccgtgggcgtcatcgccgcgcagtcgatcggcgagccc
ggcacccagctgaccatgcgcaccttccatatcggcggtgccgcgcagcgtggcgccgag
cagtcgagcgtcgaggccagccatgacggcacggtgaccatccgcaaccgcaacgtggtg
tcgaactcggccggcgcgccgatcgtcatgagccgcaactgcgagatcgcgctgaacgac
gcctccggccgcgagcgcgcccgcttccgcgttccctacggcgcccgcctgctggtggac
gaggaccagacggtcacgcgcggccagaagctcgcggagtgggatccctacaccctgccg
atcatcaccgagcgcgccggcctcgtggaatacgccgacctgctggaaggcgtgaccctg
gtcgagcgggtcgacgaggtgaccggcctgacctccaaggtggtggtggactacaagcag
tcggccaagggggcggatctgcgtccgcgcctgatcctgaaggacgaacgcggcgaggtg
ctgcgcctcgccaacggcgccgaggcccgctacttcctcagccccgactcgatcctctcg
gtcgagaacggtgccagcgtgcatgccggcgacgtgctcgcccgcatcccgcgtgagggc
agcaagacgcgcgacatcaccggcggtctgccgcgcgtggccgaactgttcgaggcccgc
cgtccgaaggatcacgcgatcatcgcggaaaccgacggccgcgtggaattcggcaaggac
tacaaggcgaagcgccgcatcatcgtgaagaacgacgagaccggcgaggaaaccgagtat
ctggtgccgaagggcaagcacgtctcggtgcaggagggcgactacgtccaccgcggcgac
ccgctggtcgacggcccgcgcgtcccgcacgacatcctgcgcgtgctcggcgtcgaggcg
ctgtccgaatatctcatcaacgagatccaggacgtctaccggctccagggcgtgaagatc
aacgacaagcacatcgaggtggtcgtccgccagatgctgcagaagatcgagatcaccgag
cccggcgacaccacctacctggtgggcgagctggtcgaccggatcgagttcgacgaggag
aacgagcgccggctgcgcgcgggcgaacgcccggcgggcggcctgccggtgctgcagggc
atcaccaaggcgagcctgcagacgctcagcttcatctcggcggcctccttccaggagacc
acccgcgtcctcaccgaggcggcgacggccggcaagaccgaccagctgctcggcctcaag
gagaacgtgatcgtcggccgcctgatcccggccggcaccggcagcgtgatgagccgtctg
cgctccatcgccgccggccgcgaccgctcgaccctcgcggcgactcgcccggccctgccg
gcgcgcgacgaggtctcggcggactga
DBGET
integrated database retrieval system
