Acidiphilium multivorum: ACMV_29650
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Entry
ACMV_29650 CDS
T01446
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
amv
Acidiphilium multivorum
Pathway
amv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACMV_29650 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amv03019
]
ACMV_29650 (rhlE)
Enzymes [BR:
amv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACMV_29650 (rhlE)
Messenger RNA biogenesis [BR:
amv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACMV_29650 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
BAJ82312
UniProt:
F0J4W5
LinkDB
All DBs
Position
3234634..3236046
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AA seq
470 aa
AA seq
DB search
MTDFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGKTAAFVLPI
LHRIAANRARPAPRACRALVLAPTRELATQIADAARTYGKFTRPSVAVVIGGAKPGPQAR
RMESGVDLLVATPGRLLDHVAAGVIRLDAVETVVLDEADQMLDLGFIPAIRQIMAKLPRQ
RQAVMFSATMPKPIRALAGEFLRDPREVAVSVESKPVDRIDQQVLLLAPEEKKDKLAWLL
ADVAVERAIVFTRTKHGADKVTRHLEDAGIGAAAIHGNKSQGQRERALDQFRSGRIRVLV
ATDIAARGIDVDNVSHVVNFELPNVPESYVHRIGRTARAGAEGVAISLVEPSELPYLRDI
ETLIGRHLVPGGAQPVRGLAPPHLLRARNQVARQGQMPKRNGPPKAAHAGHGHGGGHGGG
HHGQGHGHGGGNAHHGKPAHAKAGGKPQGRGRSAGGGRGRSSDRAVNRVA
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgattttaccaccctcggcctcgccgagcccctgctgcgcgccatcagcgagcag
tcctatgaaacccccaccccgatccaggcccgttcgatcccggtgatgctcgaaggccac
gacctcgtcggcatcgcccagaccggcaccggcaagacggccgccttcgtgctgccgatc
ctgcaccggatcgcggcgaaccgcgcccgcccggcgccgcgcgcctgccgcgccctggtc
ctcgcccccacccgcgagctcgccacccagatcgccgatgccgcccgcacctacggcaag
ttcacccgtccctcggtcgccgtcgtcatcggcggcgccaagcccggcccgcaggcccgc
cgcatggaatccggggtcgacctgctggtcgccacccccggccgcctgctcgaccatgtc
gccgccggcgtcatccgcctcgatgcggtggaaaccgtggtgctcgacgaggccgaccag
atgctcgatctcggcttcatcccggcgatccgccagatcatggcgaagctgccccgccag
cgccaggcggtgatgttctcggccaccatgccgaagccgatccgcgcgctggccggcgaa
ttcctgcgcgacccgcgcgaggtcgcggtcagcgtcgaatcgaagccggtcgaccggatc
gaccagcaggtgctcctcctcgcccccgaggagaagaaggacaagctcgcctggctgctg
gccgatgtcgcggtcgagcgcgccatcgtcttcacccgcaccaagcacggcgccgacaag
gtcacccgccatctcgaggatgccggcatcggcgccgccgcgatccacggcaacaagagc
cagggccagcgcgagcgcgcgctcgaccagttccgctccggccgcatccgcgtgctcgtc
gcgaccgacatcgccgcccgcggcatcgatgtcgacaacgtctcgcatgtggtgaatttc
gagctgccgaacgtgccggaatcctacgtccaccgcatcggccgcaccgcccgcgccggc
gccgagggtgtggcgatctcgctggtcgagccctccgagctgccctatctgcgcgatatc
gagacgctgatcggccgccatctcgtccccggcggcgcccagccggtgcgcggcctcgcg
ccgccgcatctcctccgcgcccgcaaccaggtcgcccgccaggggcagatgcccaagcgc
aacggcccgcccaaggccgcgcatgccggccacggccatggcggcggtcacggcggcggc
caccacggtcagggccatggtcatggcggcggcaacgcccatcacggcaagcccgcccac
gccaaggccggcggcaagccgcagggccgcggccgctcagccggcggcggtcgggggcgt
tcgtccgatcgcgcggtaaatcgtgttgcgtga
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