Pelagerythrobacter marensis: AM2010_1291
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Entry
AM2010_1291 CDS
T03951
Name
(GenBank) RNA-metabolising metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
amx
Pelagerythrobacter marensis
Pathway
amx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AM2010_1291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amx03019
]
AM2010_1291
Messenger RNA biogenesis [BR:
amx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AM2010_1291
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
RMMBL
Lactamase_B_2
RNase_J_C
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AKM07364
UniProt:
A0A0G3X9S3
LinkDB
All DBs
Position
complement(1357078..1358724)
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AA seq
548 aa
AA seq
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MKKNFAPEKELLFLALGGSGEIGMNVNLYGCDGKWLMVDLGMTFSGGEYPGVDLVFADLE
FIEDRAKDLVGIVLTHAHEDHIGAVPYFAAELGVPLYATPFTADLVRRKLDEAGLTRQVE
LNVVEDTDRFDLGPFGISYLPLAHSIAEGHALLLDTPYGRVFHTGDWKLDEDPIVGVPTT
EEELVAVGDEGVLALVCDSTNVFNPNPSGSEGAVYTGLMDEVKRHRGRRVLVTTFASNVA
RLHTLGEVAKATGRQLCVAGRSLDRIIEVAQDNGYLEELPDLVDFDTAMGLPRGEVLIIA
TGGQGEPRAALARIAEGNHPIELTAGDVILFSSRQIPGNEIAIGRVQNQLAERGIVMVAD
RQSEIHVSGHPGRPELEALYEWLRPEILVPVHGEMRHMQEQARLGLAHGIPRAVAQKNGD
MVRLAPGEPGKIAEVTAGRLVLDGDIIAPANGEGIVMRRRIAAEGALIVVLGPRLTVEVE
TFGLPLEEDMDEFIAETKADILGAIGKLRGNAHNDRAEVSEAARLAARRAARRWSGKSPQ
VKVVIVGG
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaacttcgcgcctgagaaagagctgctgttcctcgcgctcggcggatcgggc
gaaataggcatgaacgtcaacctatatgggtgcgacggcaagtggctgatggtcgacctc
ggcatgacgttttcgggcggcgagtatcccggcgtggacctcgtgttcgccgatctcgag
tttatcgaagatcgggcgaaggatctggtcggcatcgttttgacccatgcccacgaagac
catatcggcgctgttccctatttcgcggccgaactgggtgtccccctctatgccacgcca
ttcacggccgaccttgtccggcgcaagctcgacgaagcggggctgacgcggcaggtcgaa
ctcaacgtggtcgaagacaccgatcggttcgacctggggccattcggcatttcctatctg
ccgcttgcgcactcgatcgccgaaggtcacgcgctgctgctcgatacgccttatggccgg
gtgttccatactggcgattggaagctggacgaagatccgatcgtgggcgtgcccaccacc
gaagaggaactggttgccgttggcgacgaaggcgtgctcgcgctggtgtgcgattcgacc
aatgttttcaatccgaaccccagcggctccgaaggtgcggtctataccgggctgatggac
gaggtgaagcgccacagggggcggcgcgtgctggtgaccacgttcgcttccaatgtcgcg
cgcctgcataccctgggtgaggtggccaaggccaccgggcggcagctttgcgttgccggg
cgttcgctggaccgcatcatcgaagtcgcgcaggacaacggctatctcgaagagctgccc
gatctcgtcgatttcgacaccgccatgggcctgccacggggcgaagtgctgatcattgcg
acgggcgggcagggggagccgcgggcggccctcgcgcggattgcggagggcaatcatccg
attgagctgaccgcaggcgatgtcatcctgttttccagccgccagatccccggaaacgag
atcgccattggccgtgtgcagaaccagttggcggagcggggcattgtgatggtggccgac
cggcagagcgagattcacgtgtcgggccatccggggcggccggagcttgaggcattgtac
gaatggctgcggccggaaatcctcgttccggttcatggcgagatgcgtcacatgcaggaa
caggctcgtcttggtctggcgcacggtatcccgcgcgctgtggcgcagaagaatggcgat
atggtgcgtctggcgccgggcgaaccgggcaagattgctgaagtgaccgccggccggctt
gttctcgatggcgacattatcgcgcccgcaaatggcgaagggatcgtcatgcggcggcgc
attgcggcggaaggcgcgctgatcgtcgtccttgggccgcggctgactgtggaagtcgaa
acgttcggcctgccgctggaagaagacatggacgaattcattgccgagacaaaggccgac
atactcggtgcgatcggcaagctgcgcggcaacgcgcacaatgaccgcgccgaagtgtcg
gaagccgcacgactggccgcgcgccgcgccgcgcgccgctggtcgggcaagagcccacag
gttaaagtcgtgatagtcgggggttga
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