Pelagerythrobacter marensis: AM2010_1915
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Entry
AM2010_1915 CDS
T03951
Name
(GenBank) RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
amx
Pelagerythrobacter marensis
Pathway
amx02020
Two-component system
amx02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
amx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AM2010_1915
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AM2010_1915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amx03021
]
AM2010_1915
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
amx02035
]
AM2010_1915
Transcription machinery [BR:
amx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AM2010_1915
Bacterial motility proteins [BR:
amx02035
]
Flagellar system
Flagellar assembly proteins
Stator
AM2010_1915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
TY-Chap3
KORA
Consortin_N
Motif
Other DBs
NCBI-ProteinID:
AKM07977
UniProt:
A0A0G3X9V0
LinkDB
All DBs
Position
2042545..2043291
Genome browser
AA seq
248 aa
AA seq
DB search
MAESRRDTSGLALLVRPDRMEAAWWRAWTQDACEEARRKLFDHHRKLADSIALAQHGKRP
PGTHDLGDVRQLAYEGLIQAITRFDPTRAVPFSAFARMRITGNIANGLASMSEASAQYAY
ARRVERDRLRSLEPSPAETSSPISALAGLASRIALGLMLENREPVEPDTIPTPAPDAYQS
LAWRDMQERLTRALEQLSDREAYVLRQHYHHAVNFVQIAGLLGVTKGRVSQIHRAALDRL
RQILGEVG
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggccgagagcaggcgggataccagcgggctcgcccttctcgttcgacccgatcggatg
gaggcggcatggtggcgggcatggacgcaggacgcctgcgaggaagcgcgccgcaagctg
tttgaccatcaccgaaagctcgcagattcgatcgctctggcgcagcacggaaagcgtccc
cccggcacccacgacctcggcgatgttcggcaacttgcctacgagggcctgattcaggcg
attacccggttcgatccgaccagggcggttccctttagcgcctttgcccgaatgcgcatt
acgggaaacatcgccaatgggcttgcatcaatgtccgaagccagcgcacaatatgcatac
gcacgccgggtggaacgcgatcgcctgcgttcgctagaaccgtcgccggcggaaacctcc
agtccaatctccgctttggctggccttgcatcgcgtatcgccctcggcctgatgctggag
aatcgcgagccggtcgaaccggatacgattcccacgccggcgccggatgcgtaccagagc
ctcgcttggcgcgatatgcaggaacggctaaccagggcgctggaacaactcagcgatcgc
gaagcctatgtgcttcggcagcactatcaccatgcggtcaacttcgtgcagatcgccggg
ttgctcggcgtgacaaagggaagggtctcacaaattcatcgcgcggcgctcgatcgattg
cgtcagattctcggcgaggttggatag
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