Pelagerythrobacter marensis: AM2010_1979
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Entry
AM2010_1979 CDS
T03951
Name
(GenBank) DNA-directed RNA polymerase subunit beta''''
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
amx
Pelagerythrobacter marensis
Pathway
amx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
amx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AM2010_1979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amx03021
]
AM2010_1979
03400 DNA repair and recombination proteins [BR:
amx03400
]
AM2010_1979
Enzymes [BR:
amx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AM2010_1979
Transcription machinery [BR:
amx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AM2010_1979
DNA repair and recombination proteins [BR:
amx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AM2010_1979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Peptidase_M23
Apocytochr_F_C
RPOC_hybrid
YqfD
Motif
Other DBs
NCBI-ProteinID:
AKM08041
UniProt:
A0A0G3XBQ5
LinkDB
All DBs
Position
complement(2106091..2110413)
Genome browser
AA seq
1440 aa
AA seq
DB search
MNELTKFTNQLAKPETFDQIQIGIASPERIRSWSFGEIKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRMKYKGVVCEKCGVEVTVTKVRRERMGHIELAAPVAHIWFLKSL
PSRIGLLLDMQLKQLERVLYFEAYIVTEPGLTPLEKFQLLTEDELLEAQDEYGEDAFTAG
IGAEAVKIMLMDLDLEQEKADLLEELETTKSKLKPAKIIKRLKVVESFIDSGNRPEWMIL
EVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIVRNEKRML
QEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTGP
ELKLHQCGLPKKMALELFKPFIYARLDAKGLSMTLKQAKKWVEKERKEVWDILDEVIREH
PVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQLE
ARVLMMSTNNILSPANGKPIIVPSQDMVLGLYYLSMDREGEPGEGMALADMAEVHQALEV
GAVTLHTKITSRVPQADEKGEISMKRFETTPGRMLIGECLPKSHKVPFDIVNHLLTKKEI
GDVIDQVYRHTGQKDTVLFADAIMSLGFRHAFKAGISFGKDDMIIPGEKEKLVDETKALV
ADYEQQYQDGLITQQEKYNKVIDAWSRCGDQVADAMMDMIKARPKDENGREAEINSIYMM
SHSGARGSPAQMKQLAGMRGLMAKPSGEIIEQPIISNFKEGLTVLEYFNSTHGARKGLAD
TALKTANSGYLTRRLVDVSQDCVIVEDDCKTDNSLEMRAIVQGGSVIASLGERILGRTVA
EDILDASSGDVIVKAGTLLDEAMVKTIEDAEVQVAKIRSPLVCEAEQGVCARCYGRDLAR
GTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNETSHLEAVSDGKVVYRDMPTI
ADKKGRILSLARNGELAVIDAEGREREIHKVPYGTVLMHKDGAKVKEGDRLAEWDPFTLP
IITEQSGIVRYQDLIDSTTMEERVDEATGIAQRVVTELRASGRKKKEDLRPRLTLLGEEG
KKGEETEAARYMLAPGTSLSVEDGQRVEAGDILARASREAAKTRDITGGLPRVAELFEAR
IPKDNAIIAKISGKIEFVREYKAKRKIAIVPEEGNPVEYLVPKTKVIDVQEGDFVKKGDT
LISGSPNPHDILEVLGVEALAEYLCTEIQEVYRLQGVKINDKHIEVIVRQMLQKVEITDG
GDTTLLPGEQVDLGEMNEINGKLGRNKQPAQGHPILLGITKASLQTRSFISAASFQETTR
VLTQAAVEGKKDTLVGLKENVIVGRLIPAGTGAAMNRARVTASSRDAALRATWKKQQEAL
LAAQTAAEEREAELAQGAEAAVGDDPLARVEGETHGTDADAGEYLQQSDEGETTKAADEE
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaactgaccaaattcaccaaccaactggccaagccggaaaccttcgaccagatc
cagatcgggatcgcctcgccagagcgtatccgttcgtggtcgttcggcgagatcaagaag
ccggaaacgatcaactaccgcacgttcaagccagagcgtgacgggttgttctgtgcgcgc
atcttcggcccggtgaaggactacgagtgcctgtgcggcaagtacaagcgcatgaagtac
aagggcgtcgtctgcgaaaagtgcggcgtcgaagtgaccgtgacgaaggtgcgccgcgag
cgcatgggccatatcgaactggccgcgccggtcgcgcatatctggttcctcaagtcgctg
cccagccgcatcggcctgctgctcgacatgcagctcaagcagcttgagcgcgtgctgtac
ttcgaagcctatatcgtcaccgaaccgggcctgacgccgctggagaaattccagctgctg
accgaagacgagctgctcgaagcgcaggacgagtatggcgaagacgccttcaccgccggc
atcggcgcggaagcggtgaagatcatgctgatggacctcgacctggaacaggaaaaggcc
gacctgctcgaagagctggaaaccaccaagtccaagctcaagccggccaagatcatcaag
cgtctgaaggtcgtcgaaagcttcatcgattcgggcaaccgtcccgaatggatgatcctt
gaagtcgtgcccgtgatcccgcccgaactgcgcccgctggtgccgctcgacggggggcgt
ttcgcgacctcggatctcaacgatctctatcgccgcgtcatcaaccgtaacaatcgcctc
aagcggctgatggaactgcgcgcgccggacatcatcgtccgcaacgaaaagcgcatgctg
caggaagcggtcgacgcattgttcgacaacggccgccgcggccgcgtgatcaccggcgcc
aacaagcgtccgctgaaatcgctcagcgacatgctcaagggcaagcagggccgcttccgc
cagaaccttctgggtaagcgcgtcgactattcgggccgttcggtcatcgtgaccggtccc
gaactcaagctgcaccagtgcggcctgccgaagaagatggcgctcgaactgttcaagccg
ttcatctacgcccgcctcgacgccaagggtctgtcgatgaccctcaagcaggcgaagaag
tgggtcgagaaggagcgcaaggaagtctgggacatcctcgacgaagtcattcgcgagcac
ccggtcctcctgaaccgcgcgccgacgcttcaccgccttggcatccaggcgttcgaaccc
gtgttgatcgaaggcaaggcgatccagctgcacccgctggtctgcgccgccttcaacgcc
gacttcgatggcgaccagatggccgtccacgttccgctgagccttgaggcgcagctggaa
gcgcgcgtgttgatgatgtcgaccaacaacatcctcagccccgccaacggcaagccgatc
atcgtgccttcgcaggacatggtgctgggcctctattacctgtcgatggatcgcgaaggc
gagcccggcgaaggcatggcgctggccgacatggccgaagtgcatcaggcgctggaagtc
ggtgccgtcacgctgcacaccaagatcaccagccgggtgccgcaggcggacgagaagggc
gaaatctcgatgaagcggttcgagacgaccccgggccgcatgctgatcggcgaatgcctg
cccaagagccacaaggtgccgttcgacatcgtcaatcaccttctgaccaagaaggaaatc
ggcgacgtcatcgaccaggtctatcgccacaccgggcagaaggacacggtgctgttcgcc
gacgcgatcatgtcgctcggcttccgccacgcgttcaaggccggcatttcgttcggcaag
gatgacatgatcatcccgggcgagaaggaaaagctggtcgacgagaccaaggccctcgtc
gccgattacgagcagcagtatcaggacggcctgatcacccagcaggaaaagtacaacaag
gtgatcgacgcctggagccgctgcggcgaccaggtggcggacgccatgatggacatgatc
aaggcccgcccgaaggacgagaatggccgcgaggcggaaatcaactcgatctacatgatg
agccattccggtgcgcgtggttcgcccgcgcagatgaagcagctggcgggcatgcgcggt
cttatggccaagccgtcgggcgagatcatcgaacagccgatcatctcgaacttcaaggaa
ggcctgaccgttcttgaatacttcaactcgacccacggcgcccgtaagggtctggccgat
accgcgctcaagacggcgaactcgggctatctgacccgccgtctggtcgacgtgtcgcag
gattgcgtgatcgtcgaagacgattgcaagaccgacaacagcctggaaatgcgcgccatc
gtgcagggcggttcggtcatcgcgtcgcttggcgagcgtatcctgggccggaccgtggcc
gaggatatcctcgatgcgtcgagcggcgacgtcatcgtcaaggcgggcaccctcctcgac
gaagcgatggtgaagacgatcgaagatgccgaagtgcaggttgccaagatccgttccccg
ctggtctgcgaggcggaacagggcgtctgtgcgcgctgctacggccgcgatctggcccgc
ggtacgccggtcaacatcggcgaggcggtcggcgtgatcgccgcccagtcgatcggcgag
ccgggcacgcagctgacgatgcggacgttccacatcggcggtgcggcgcagctcaacgaa
acgagccacctcgaagcggtgtcggacggcaaggtcgtgtatcgcgacatgccgaccatc
gccgacaagaagggccgcatcctcagcctcgcccgcaatggcgagctggcggtgatcgac
gccgaagggcgcgagcgcgagatccacaaggtcccctacggcaccgtgctgatgcacaag
gatggcgccaaggtgaaggaaggcgatcgcctggccgaatgggatccgttcaccctgccg
atcatcaccgagcaatcgggcatcgtgcgctatcaggatctgatcgacagcacgacgatg
gaagagcgcgtggacgaggccactggcatcgcccagcgtgtcgtcaccgaactgcgtgcc
agcgggcgcaagaagaaggaagatcttcgtccgcgcctcaccctgctgggcgaggaaggc
aagaagggcgaggaaaccgaggcagcgcgctacatgctcgcgcccggcacatcgctctcg
gtcgaggatggccagcgggtcgaagcgggcgacattctcgcccgtgcctcgcgcgaagcc
gccaagacgcgcgacatcaccggcggtctgccgcgtgttgccgagctgttcgaagcgcgt
attcccaaggacaatgcgatcattgccaagatttcgggcaagatcgaattcgtccgcgaa
tacaaggcgaagcgcaagatcgcgatcgttcccgaggagggtaacccggtcgaatacctg
gtgcccaagaccaaggtgatcgacgtgcaggaaggcgacttcgtcaagaagggcgatacg
ctgatctcgggctcacccaatccgcacgacattctggaagtgctcggcgtcgaggcgctg
gccgaatatctctgcaccgagatccaggaagtctatcgactccagggcgtgaagatcaac
gacaagcacatcgaggtgatcgttcgccagatgctgcagaaggtcgagatcaccgatggt
ggcgataccacgctgctgccgggcgagcaggtcgatctgggtgagatgaacgagatcaac
ggcaagctgggccggaacaagcagccggcgcagggccatccgatcctgctcggcattacc
aaggccagcctgcagacgcgcagcttcatctctgccgcttcgttccaggaaaccactcgc
gtgctgacgcaggcggcggtcgaagggaagaaggatacgctggttggtctgaaggaaaac
gtgatcgtcggccgtctcatccccgccggtaccggcgcggcgatgaaccgggcgcgggtc
accgcttccagccgcgatgccgcactgcgggcgacgtggaagaagcagcaggaagcgctg
ctggccgcgcagaccgctgccgaggagcgtgaggccgaactggcccagggcgccgaagcc
gcggtgggcgacgatccgctcgcacgggtcgagggcgaaacccacggcaccgatgccgat
gcgggcgaatacctgcagcagtcggacgagggtgaaaccaccaaggctgccgacgaggaa
taa
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