Pelagerythrobacter marensis: AM2010_1990
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Entry
AM2010_1990 CDS
T03951
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
amx
Pelagerythrobacter marensis
Pathway
amx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AM2010_1990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amx03019
]
AM2010_1990
03110 Chaperones and folding catalysts [BR:
amx03110
]
AM2010_1990
03029 Mitochondrial biogenesis [BR:
amx03029
]
AM2010_1990
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amx04147
]
AM2010_1990
Enzymes [BR:
amx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AM2010_1990
Messenger RNA biogenesis [BR:
amx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AM2010_1990
Chaperones and folding catalysts [BR:
amx03110
]
Heat shock proteins
HSP60 / Chaperonin
AM2010_1990
Mitochondrial biogenesis [BR:
amx03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AM2010_1990
Exosome [BR:
amx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AM2010_1990
Exosomal proteins of other body fluids (saliva and urine)
AM2010_1990
Exosomal proteins of breast cancer cells
AM2010_1990
Exosomal proteins of colorectal cancer cells
AM2010_1990
Exosomal proteins of bladder cancer cells
AM2010_1990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AKM08052
UniProt:
A0A0G3XA64
LinkDB
All DBs
Position
2120298..2121944
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGRDAREGILRGVDTLANAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEI
ELKNKFENMGAQMIKEVASKANDAAGDGTTTATVLAQSIVTEGMKSVAAGMNPMDLKRGI
DLAVTKVVEDLKARSKDVSGSNEIAQVGIISANGDREVGEKIAEAMEKVGKEGVITVDES
KGLEFELETVEGMQFDRGYLSPYFITNPEKMTVELENPYILIHEKKLSNLQAMLPVLEAA
VQSGRPLLIIAEDIEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLQDIAILTQGEM
ISEDLGIKLENVTLNMLGQAKKVTIDKDNTTIVDGAGSEDDIKARVSEIRTQIDNTTSDY
DREKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALL
YATKALDGLEGSNDDQTRGIDIIRRALQAPVRQIATNAGHDGAVVAGKLTDANDTSLGFN
AATDTYEDLVKAGVIDPTKVVRTALQDAASVAGLLITTEATITEIPDDKPAAPMPDMGGM
GGMGGMGF
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaggacgtaaagttcggccgcgacgcgcgcgaaggcatcctgcgcggcgtc
gacaccctcgccaatgccgtcaaggtcacgctgggccccaagggccgcaacgtcgtgatc
gacaagagcttcggcgccccgcgcatcaccaaggacggcgtcaccgtcgccaaggaaatc
gaactgaagaacaagttcgaaaacatgggcgcgcagatgatcaaggaagtcgcatcgaag
gcgaacgacgccgccggtgacggcaccaccactgcgaccgttctggcgcagtcgatcgtg
accgaaggcatgaagtcggtcgccgcgggcatgaacccgatggacctgaagcgcggcatc
gatctcgccgtcaccaaggttgtcgaagacctcaaggcccgttcgaaggacgtctccggc
tcgaacgaaatcgcgcaggtcggcatcatttcggccaatggcgatcgtgaagtcggcgaa
aagatcgccgaagcgatggagaaggtcggcaaggaaggcgtgatcaccgtcgacgagtcg
aagggcctcgaattcgagctcgaaaccgtcgaaggcatgcagttcgaccgcggctatctg
tcgccctacttcatcaccaacccggaaaagatgacggtcgaactcgaaaacccgtacatc
ctgatccatgaaaagaagctgagcaatctgcaggcgatgcttccggtgctcgaagcggct
gtccagtcgggccgtccgctgctgatcatcgcggaagacatcgaaggcgaagcgctggcc
accctcgtggtcaacaagctgcgcggcggcctgaaggtcgcggcggtcaaggcaccgggc
ttcggcgatcgccgcaaggccatgctgcaggacatcgcgatcctgacgcagggcgaaatg
atcagcgaagatctcggcatcaagctcgagaacgtgacgctgaacatgctcggccaggcc
aagaaggtcaccatcgacaaggacaacacgaccattgtcgacggtgccggttcggaagac
gacatcaaggcccgcgtttcggaaatccgcacgcagatcgataacaccaccagcgattac
gaccgtgaaaagctgcaggaacgtctggcgaagctcgccggcggtgttgcggtgatcaag
gtcggcggtgcgaccgaagtcgaagtgaaggaacgcaaggaccgcgtcgacgatgcgctg
cacgcaacccgcgcagccgtcgaagaaggcatcgtcccgggcggcggtaccgcgctgctc
tacgcgaccaaggcgctcgacggcctcgaaggcagcaacgacgaccagacccgcggcatc
gacatcatccgtcgcgcgctgcaggctccggttcgccagatcgccaccaacgccggccat
gacggtgcggtggttgccggcaagctgaccgacgccaacgacacctcgctcggcttcaac
gcggcgaccgacacttacgaagacctggtcaaggccggcgtcatcgacccgaccaaggtt
gtgcgcaccgcgctgcaggatgccgcttcggtggccggcctgctgatcacgaccgaagcc
accatcacggaaattccggacgacaagccggctgctccgatgcccgacatgggcggcatg
ggtggcatgggcggcatgggcttctaa
DBGET
integrated database retrieval system
