Pelagerythrobacter marensis: AM2010_475
Help
Entry
AM2010_475 CDS
T03951
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
amx
Pelagerythrobacter marensis
Brite
KEGG Orthology (KO) [BR:
amx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amx03032
]
AM2010_475
03400 DNA repair and recombination proteins [BR:
amx03400
]
AM2010_475
Enzymes [BR:
amx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AM2010_475
DNA replication proteins [BR:
amx03032
]
Prokaryotic type
DNA Topoisomerases
AM2010_475
DNA repair and recombination proteins [BR:
amx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AM2010_475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AKM06562
UniProt:
A0A0G3X5W9
LinkDB
All DBs
Position
502432..503433
Genome browser
AA seq
333 aa
AA seq
DB search
MTKLIYVDDDLPGISRKRAGRGWAYYDPKGKLIRDADERARLNAIALPPAYREAWFCPAP
NGHILATGVDARGCKQYRYHPEFRAARESEKFDGCLPFGGLLPLVRKRVESDLSARTLTR
ERAIASVVRLLDLGAVRIGNEGYARDNRSYGATTLRQRHAEVTGKTLRLRYKAKGGKLRE
VALTDGSLARVVRRMQDLPGQNVFKYVDDAGDLHTVGSHDVNEYLCDTMGERFTAKNFRT
WHASVLAFQLLAEAEETLTIKAVLDVVAGRLGNTPAVTRRSYVHPAVIDLVGRQGAWRET
LRLPRGTQWLTREERGLIALLEDAPCAQELLAA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagctgatctatgtcgacgatgaccttccgggcatttcgcgcaagcgcgcaggg
cgcggctgggcctattacgatccgaagggcaagctgatccgcgacgcggacgagcgcgcc
cggctgaacgcgatcgccctgccgccggcctatcgtgaggcatggttctgccccgcgccc
aatggccatatcctggccaccggggtcgatgcgcgcgggtgcaagcaataccgttatcac
cccgaatttcgcgccgcgcgcgaaagcgagaagttcgacgggtgcctgccgtttggcggc
ctgctgccgctggtccgcaagcgggtggaaagcgacctttcggcacgcacgctgacccgc
gagcgagcgatcgccagcgtggtgcgcctgctggatctgggcgcggtgcggatcgggaac
gaaggatatgcgcgcgacaatcgcagttacggcgcaaccaccctgcgccagcgccacgcc
gaagtgaccggcaagacgctgcgcctgcgctacaaggcgaaggggggcaagctgcgcgaa
gtcgcgttgaccgacggcagcctggcgcgcgttgtccgccggatgcaggacctgccgggg
cagaacgtgttcaagtacgtggacgacgcaggcgacctccacacggtcggatcgcacgac
gtcaacgaatacttgtgcgacacgatgggcgagcgcttcaccgccaaaaatttccgcacc
tggcacgccagcgttctggccttccagcttctcgccgaagcggaggaaacgctgacgatc
aaggccgtgctggatgtcgtcgcggggcggctgggcaatacccctgcagtgacccgccgg
tcctacgtccatccggcggtgatcgatctggtgggccggcagggcgcgtggcgcgagacg
ctgcgtctgccgcgcggcacccagtggctgacgcgcgaggagcgcggactgatcgccctg
ctggaagatgcgccctgcgcgcaggagctgctggcggcatga
DBGET
integrated database retrieval system
