Pelagerythrobacter marensis: AM2010_526
Help
Entry
AM2010_526 CDS
T03951
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
amx
Pelagerythrobacter marensis
Pathway
amx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
amx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AM2010_526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amx03021
]
AM2010_526
03400 DNA repair and recombination proteins [BR:
amx03400
]
AM2010_526
Enzymes [BR:
amx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AM2010_526
Transcription machinery [BR:
amx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AM2010_526
DNA repair and recombination proteins [BR:
amx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AM2010_526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
DUF211
RNA_pol_L_2
IDH
Phage_tube_2
Motif
Other DBs
NCBI-ProteinID:
AKM06613
UniProt:
A0A0G3X8E0
LinkDB
All DBs
Position
542082..543137
Genome browser
AA seq
351 aa
AA seq
DB search
MAVNTKNWQELKKPNSLEIKAAGDKSRKVTFVAEPLERGFGLTLGNALRRVLLSSLQGAA
ITSIKIENVLHEFSSLAGVREDVTDIVLNVKQIALKMEGEGPKRLQLNKTGPGAVTAGDI
AVSGDIEVMNKDLVICHLDEGANLSMELTADTGKGYVPAVQNRPADAPIGLIPVDSLYSP
VRQVSYKVEAARVGQELDFDKLNLTIETDGTVTPEDAVAYAARILQDQLTLFVHFEEGIP
QPSSTMIGQAAQPEESDANQLNRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKTEAE
MLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcaacaccaagaactggcaggaactcaagaagcccaacagcctcgaaatcaag
gccgccggcgacaaatcgcgcaaggtcactttcgtcgcggaacccctggagcgcggcttc
ggcctgacgctcggcaacgcgctgcgtcgcgtgcttctttccagtcttcagggcgcggcg
atcacctcgatcaagatcgagaacgtgctgcacgagttctcctcgctcgccggtgtgcgc
gaggacgtgaccgacatcgtgctgaacgtcaagcagatcgcgctcaagatggaaggcgaa
ggtcccaagcggcttcagctgaacaagaccggcccgggtgcagttaccgccggggacatt
gccgtttcgggcgatatcgaggtgatgaacaaggatctcgtgatctgtcatctcgacgaa
ggcgcgaacctgagcatggaactgaccgccgataccggcaagggctatgtccccgcggtg
cagaaccgtccggccgatgcgccgatcggcctgatcccggtcgactcgctctattcgccg
gtgcgccaggtcagctacaaggtcgaggcggcccgtgtcggccaggaactcgacttcgac
aagctcaacctcacgattgaaaccgacggcaccgtcaccccggaagatgccgtggcctat
gccgcgcgtatcctgcaggaccagctgacgctgttcgtccacttcgaagaaggcattccg
cagcccagctcgaccatgatcgggcaggcggcgcagccggaagaaagcgacgccaaccag
ctcaaccgttaccttctcaagaaggtggacgagctggaactgtcggtgcgttcggccaac
tgcctcaagaacgacaacatcatctacatcggcgacctggtccagaagaccgaggccgag
atgctccgcacgccgaacttcggccgcaagtcgctcaacgagatcaaggaagtgctttcg
tcgatgggtctgcgcctcggcatggacatcccgggctggccgcctgaaaacattgaagaa
atggccaagaagctcgaacaggaactgcttggttga
DBGET
integrated database retrieval system
